SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene19189

Length: 231 nt

UniGene Fasta

>biog3_v1.0_unigene19189
AATGTAAGTGCGAATAAGAACATTTGCACAAACTTCATAGAAACAAAAGCAATACGGGTTTGCCAAGGAACGTATGATGCATTTATAATGAAAGCATGGGAAGATTGGGATGAAAAACACACATCAGAAAATGACCATCCTATGTTATTTCCAGAAAAGCAGTTGTACATAACATTTATTCTAGCAGATGGAGGACAGGACCTCGAGAGTTTTGTGCTTTCGGACTACATT

Ace file of the UniGene biog3_v1.0_unigene19189

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene59349	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	67%
Blast2go	serine threonine-protein kinase haspin-like	-	-	3.875e-21	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	mitosis	GO:0007067	Biological Process	3.875e-21	75%
Blast2go	histone H3-T11 phosphorylation	GO:0035407	Biological Process	3.875e-21	75%
Blast2go	histone kinase activity (H3-T11 specific)	GO:0035402	Molecular Function	3.875e-21	75%
Blast2go	cytoplasm	GO:0005737	Cellular Component	3.875e-21	75%
Blast2go	nucleus	GO:0005634	Cellular Component	3.875e-21	75%
Blast2go	histone kinase activity (H3-T3 specific)	GO:0072354	Biological Process	3.875e-21	75%
Blast2go	histone H3-T3 phosphorylation	GO:0072355	Biological Process	3.875e-21	75%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6I4H2

Fln msg: Distance to subject end: 177 aas, your sequence is shorter than subject: 77 - 635

Fln protein: NVSANKNICTNFIETKAIRVCQGTYDAFIMKAWEDWDEKHTSENDHPMLFPEKQLYITFILADGGQDLESFVLSDYI

Protein Length: 78

Fln nts: AATGTAAGTGCGAATAAGAACATTTGCACAAACTTCATAGAAACAAAAGCAATACGGGTTTGCCAAGGAACGTATGATGCATTTATAATGAAAGCATGGGAAGATTGGGATGAAAAACACACATCAGAAAATGACCATCCTATGTTATTTCCAGAAAAGCAGTTGTACATAACATTTATTCTAGCAGATGGAGGACAGGACCTCGAGAGTTTTGTGCTTTCGGACTACATT

Fln Alignment:

biogeco3_mira_c16446___NICTNFIETKAIRVCQGTYDAFIMKAWEDWDEKHTSENDHPMLFPEKQLYITFILADGGQDLESFVLSDY
F6I4H2__________________NSCTSFIETLDLRVCQGPYDAALIRAWEDWDEKHGSENDHPREFPEKQCYVVFVLEHGGKDLESFVLLNF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain