SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene18321

Length: 223 nt

UniGene Fasta

>biog3_v1.0_unigene18321
ACTCAGGCGTTTGCAGTCTCAGTTTGATTTGCTTACTGGCCAAACTTCAGCTTTGATTCAAGGAAGACGGGCTCGTGTAGCAGCAGCCTCTACAACAAATGGACAGTTACTGCTAGTTGATGAGAAACTTGCCAGCAGGAATTTAGAGATGAATGCTGTTCTGGAGAAGATTGCTGCATCAGCCCGGGAATTGGGACATTACCATTCAGGTGAAGAGGACATT

Ace file of the UniGene biog3_v1.0_unigene18321

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene33150	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein At5g48520; Arabidopsis thaliana (Mouse-ear cress).	-	-	64%
Blast2go	haus augmin-like complex subunit	-	-	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	nucleus	GO:0005634	Cellular Component	0.0	79%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q0WQE7

Fln msg: Distance to subject end: 421 aas, your sequence is shorter than subject: 74 - 617

Fln protein: LRRLQSQFDLLTGQTSALIQGRRARVAAASTTNGQLLLVDEKLASRNLEMNAVLEKIAASARELGHYHSGEEDI

Protein Length: 75

Fln nts: ACTCAGGCGTTTGCAGTCTCAGTTTGATTTGCTTACTGGCCAAACTTCAGCTTTGATTCAAGGAAGACGGGCTCGTGTAGCAGCAGCCTCTACAACAAATGGACAGTTACTGCTAGTTGATGAGAAACTTGCCAGCAGGAATTTAGAGATGAATGCTGTTCTGGAGAAGATTGCTGCATCAGCCCGGGAATTGGGACATTACCATTCAGGTGAAGAGGACATT

Fln Alignment:

biogeco3_mira_c15249___LRRLQSQFDLLTGQTSALIQGRRARVAAASTTNGQLLLVDEKLASRNLEMNAVLEKIAASARELGHYHSGEED
Q0WQE7__________________LRRLQTQYDLLTGQSSALIQGRRARVAATSAVSGQITAIEDSLSARNLQMNGVLGRLASTSQELAHYHSGEED

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain