SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene17897

Length: 204 nt

UniGene Fasta

>biog3_v1.0_unigene17897
GGAGATAGAAGCATTCCAGTTGAAAATGATGCAGACCTTCTACACATTTCTGTTGGAGGTGTAAACAAACTTAAGTTAGTGGAGAAAACAGAAACCACAGATCCTCGACCAAGGCTTCACTGGAAGAAATCACAGCACTAGAGAAAGCTGATGAGGAATTGGCACGATTCTTACAGGCCGAAGAAGATGCTCTTGCCTTCCAGC

Ace file of the UniGene biog3_v1.0_unigene17897

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene33145	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Arabidopsis thaliana] sp\|Q9FGY9.1\|PNG1_ARATH RecName: Full=Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase; AltName: Full=Peptide:N-glycanase; Short=AtPNG1 dbj\|BAB10770.1\| unnamed pr	-	-	6.0e-15	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	peptide-n -(n-acetyl-beta-glucosaminyl)asparagine amidase	-	-	8.19558e-19	62%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.	EC:3.5.1.52	-	8.19558e-19	62%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to salicylic acid stimulus	GO:0009751	Biological Process	8.19558e-19	62%
Blast2go	response to ozone	GO:0010193	Biological Process	8.19558e-19	62%
Blast2go	response to microbial phytotoxin	GO:0010188	Biological Process	8.19558e-19	62%
Blast2go	peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	GO:0000224	Molecular Function	8.19558e-19	62%
Blast2go	cytosol	GO:0005829	Cellular Component	8.19558e-19	62%

Source	InterPros	Term	Type	e value	Identity
Sma3	Coagulation factor 5/8 C-terminal type domain	IPR000421	-	0.0	-
Sma3	Transglutaminase-like	IPR002931	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLV8

Fln msg: Distance to subject end: 621 aas, W1: There is no M at the beginning, your sequence is shorter than subject: 43 - 657

Fln protein: VSGENRNHRSSTKASLEEITALEKADEELARFLQAEEDALAFQ

Protein Length: 44

Fln nts: GGAGATAGAAGCATTCCAGTTGAAAATGATGCAGACCTTCTACACATTTCTGTTGGAGGTGTAAACAAACTTAAGTTAGTGGAGAAAACAGAAACCACAGATCCTCGACCAAGGCTTCACTGGAAGAAATCACAGCACTAGAGAAAGCTGATGAGGAATTGGCACGATTCTTACAGGCCGAAGAAGATGCTCTTGCCTTCCAGC

Fln Alignment:

biogeco3_mira_c14658___STKASLEEITALEKADEELARFLQAEEDALAFQ
B8LLV8__________________STKASLEEIKALEKADEELARLLQAEEDALAFQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain