SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene17480

Length: 211 nt

UniGene Fasta

>biog3_v1.0_unigene17480
AATGTTTCACAAAGAGTTTAGAGCATTAACAGCAGATATCATATCTCATACTGCGTTTGGTAGCAGTTACAATGAAGGCAAAGAAGTATTTGAATTGCAGAGAGAATTGCAAGAAATGGCTGCTAAAGCTGAACAATCTGTCTTCATACCGGGAAGCCAATACATTCCTACAAGAAAGAACAGGTATGCATGGAAGATTGATAGAAGAGTT

Ace file of the UniGene biog3_v1.0_unigene17480

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14455	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9RN23_RICCO	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	92%
Blast2go	cytochrome p450	-	-	76%

Source	GOs	Term	Type	Identity
Blast2go	electron transport chain	GO:0022900	Biological Process	76%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	76%
Blast2go	monooxygenase activity	GO:0004497	Molecular Function	76%
Blast2go	heme binding	GO:0020037	Molecular Function	76%
Blast2go	mitochondrion	GO:0005739	Cellular Component	76%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group II	IPR002402	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P0T0

Fln msg: Distance to subject end: 140 aas, your sequence is shorter than subject: 70 - 412

Fln protein: MFHKEFRALTADIISHTAFGSSYNEGKEVFELQRELQEMAAKAEQSVFIPGSQYIPTRKNRYAWKIDRRV

Protein Length: 71

Fln nts: AATGTTTCACAAAGAGTTTAGAGCATTAACAGCAGATATCATATCTCATACTGCGTTTGGTAGCAGTTACAATGAAGGCAAAGAAGTATTTGAATTGCAGAGAGAATTGCAAGAAATGGCTGCTAAAGCTGAACAATCTGTCTTCATACCGGGAAGCCAATACATTCCTACAAGAAAGAACAGGTATGCATGGAAGATTGATAGAAGAGTT

Fln Alignment:

biogeco3_mira_c14060___HKEFRALTADIISHTAFGSSYNEGKEVFELQRELQEMAAKAEQSVFIPGSQYIPTRKNRYAWKIDRRV
A9P0T0__________________HNEFRELTANIISHTAFGSSYNEGKEVFELQRELQEMAAKAERSVFIPGSQYIPTRKNRYAWKIDRRI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain