SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene17105

Length: 426 nt

UniGene Fasta

>biog3_v1.0_unigene17105
AATGTAAAGCTATCTGCGAGCAACGCAATGTCAACGTGGAAACTAAAATGGTGACAGGAGATGCCCGGTATGCTCTCTGTGAAGCTGCTGAAAAGATGAAGGTAAATCTCCTTGTGGTTGGAAGCCGTGGACATGGAGCCATTAGGAGGGCAGTTATGGGGAGCGTCAGCAATTACTGTGCACATCATGCTAAGTGTCCGGTGTTGATTGTGAAGAAACCAAATCAGTGAACCCAACAATGTCATGTAAAGTACCCGGTGTTGATTGTGAAGAAACCGAATCAGTGAATTGCACAGTGATGTCAATACCCAAATTTGTATATCTTCAAAGTTCGGATCTCACTATCACAATGTTCAAAATCTTGTGAACCTGGTCCTCCAGAACATGGCTTTGTTTATCTGATGGAATTATTAATAAGTGTACTAG

Ace file of the UniGene biog3_v1.0_unigene17105

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14922	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Universal stress protein n=4 Tax=Andropogoneae RepID=B6SNQ1_MAIZE	-	-	1.0e-28	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	59%
Blast2go	universal stress protein	-	-	2.60116e-36	62%

Source	InterPros	Term	Type	Identity
Sma3	Universal stress protein A	IPR006015	-	-
Sma3	UspA	IPR006016	-	-
Sma3	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NLL6

Fln msg: your sequence is shorter than subject: 76 - 177

Fln protein: CKAICEQRNVNVETKMVTGDARYALCEAAEKMKVNLLVVGSRGHGAIRRAVMGSVSNYCAHHAKCPVLIVKKPNQ*

Protein Length: 77

Fln nts: AATGTAAAGCTATCTGCGAGCAACGCAATGTCAACGTGGAAACTAAAATGGTGACAGGAGATGCCCGGTATGCTCTCTGTGAAGCTGCTGAAAAGATGAAGGTAAATCTCCTTGTGGTTGGAAGCCGTGGACATGGAGCCATTAGGAGGGCAGTTATGGGGAGCGTCAGCAATTACTGTGCACATCATGCTAAGTGTCCGGTGTTGATTGTGAAGAAACCAAATCAGTGA___ACCCAACAATGTCATGTAAAGTACCCGGTGTTGATTGTGAAGAAACCGAATCAGTGAATTGCACAGTGATGTCAATACCCAAATTTGTATATCTTCAAAGTTCGGATCTCACTATCACAATGTTCAAAATCTTGTGAACCTGGTCCTCCAGAACATGGCTTTGTTTATCTGATGGAATTATTAATAAGTGTACTAG

Fln Alignment:

biogeco3_mira_c13545___KAICEQRNVNVETKMVTGDARYALCEAAEKMKVNLLVVGSRGHGAIRRAVMGSVSNYCAHHAKCPVLIVKKP
A9NLL6__________________KEICAQKNVNAKIVMEIGDPKEAICDAVEKMKVDLLIIGSHGYGMVKRALLGSVSNYCVQHAKCPVLVVRKP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain