SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene15049

Length: 361 nt

UniGene Fasta

>biog3_v1.0_unigene15049
AATGTGGTCTTTCCTTTGGCAACACAGCCAAATCAGTAATGACGACGCTGTGCTTTTTCAGATTCTGGCTTGGCTTTGGCATCGGGGGAGATTATCCCTTGTCGGCTACCATTATGTCGGAGTATGCCAACAAGAGAACACGAGGGGCATTCATCGCGGCAGTGTTTGCTATGCAAGGCTTCGGGATCCTCGCCGGCGGTGCCGTGGCCATTATCGTCTCTGCGGGATTCAAGAACAAGTACGACCGCCCCGCATACGACGTCGATCCTCGAGGTTCGACCGCGCCGCAGGCCGATTATGTATTGCGGATCATTCTTATGTTCGGGGCCATCCCCGCTGCGTTGACATATTACTGGCGAAT

Ace file of the UniGene biog3_v1.0_unigene15049

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene64948	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	Phosphate transporter n=1 Tax=Egeria densa RepID=Q2HWF2_9LILI	-	-	73%
FL-Next	tr=Putative phosphate transporter; Cryptomeria japonica (Japanese cedar) (Cupressus japonica).	-	-	84%
Blast2go	phosphate transporter	-	-	90%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase, cysteine peptidase active site	IPR000169	-	-
Sma3	WW/Rsp5/WWP	IPR001202	-	-
Sma3	AP2/ERF domain	IPR001471	-	-
Sma3	Carbohydrate/puine kinase, PfkB, conserved site	IPR002173	-	-
Sma3	Hydroxymethylglutaryl-CoA reductase, class I/II	IPR002202	-	-
Sma3	Phosphate permease	IPR004738	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	IPR006186	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q1XG57

Fln msg: Distance to subject end: 311 aas, your sequence is shorter than subject: 119 - 544

Fln protein: CGLSFGNTAKSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGAVAIIVSAGFKNKYDRPAYDVDPRGSTAPQADYVLRIILMFGAIPAALTYYWR

Protein Length: 120

Fln nts: AATGTGGTCTTTCCTTTGGCAACACAGCCAAATCAGTAATGACGACGCTGTGCTTTTTCAGATTCTGGCTTGGCTTTGGCATCGGGGGAGATTATCCCTTGTCGGCTACCATTATGTCGGAGTATGCCAACAAGAGAACACGAGGGGCATTCATCGCGGCAGTGTTTGCTATGCAAGGCTTCGGGATCCTCGCCGGCGGTGCCGTGGCCATTATCGTCTCTGCGGGATTCAAGAACAAGTACGACCGCCCCGCATACGACGTCGATCCTCGAGGTTCGACCGCGCCGCAGGCCGATTATGTATTGCGGATCATTCTTATGTTCGGGGCCATCCCCGCTGCGTTGACATATTACTGGCGAAT

Fln Alignment:

biogeco3_mira_c9573___GLSFGNTAKSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQXXXXXXXXXXXXXXXXXXKNKYDRPAYDVDPRGSTAPQADYVLRIILMFGAIPAALTYYWR
Q1XG57__________________GLSFGHTAKSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGAVSIIVSAGFKSHFKAPAYQDDPKGSTVDEADFVWRLILMFGAVPAAMTYYWR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain