SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene13584

Length: 289 nt

UniGene Fasta

>biog3_v1.0_unigene13584
AATGTATCACTTAGTGTTTTAACAAACAATTCCAATGCGGAGTTGGACAGGGAGGTTCTACCTCAGTTTTCTGATGGTATCATGGACTTGATGAATGGACAAGATGAATACAATTATGAGAATGAACTTACCAATAAGCAATGGGCTGAAGCTGGCACTTTACTTGGTGATTGTCTCCTTTCATCTGTCAAGGTCCTTATGAATCTGACAAATGACAATCCCATTGGTTGTCACCAAGTGGCAGTTTGTGGAGGGCTAGATACAATGGCTTCATTGATTGTTGATCATT

Ace file of the UniGene biog3_v1.0_unigene13584

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene637	4/4

Source	Descriptions	Term	Type	Identity
AutoFact	WAPL (Wings apart-like protein regulation of heterochromatin) protein [Arabidopsis thaliana] gb\|AEE28678.1\| WAPL (Wings apart-like protein regulation of heterochromatin) protein [Arabidopsis thaliana]	-	-	35%
FL-Next	tr=Putative uncharacterized protein; Zea mays (Maize).	-	-	57%
Blast2go	wapl (wings apart-like protein regulation of heterochromatin) protein	-	-	55%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phospholipid/glycerol acyltransferase	IPR002123	-	0.0	-
Sma3	Pentatricopeptide repeat	IPR002885	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B4F8S5

Fln msg: Distance to subject end: 200 aas, your sequence is shorter than subject: 96 - 336

Fln protein: NVSLSVLTNNSNAELDREVLPQFSDGIMDLMNGQDEYNYENELTNKQWAEAGTLLGDCLLSSVKVLMNLTNDNPIGCHQVAVCGGLDTMASLIVDH

Protein Length: 97

Fln nts: AATGTATCACTTAGTGTTTTAACAAACAATTCCAATGCGGAGTTGGACAGGGAGGTTCTACCTCAGTTTTCTGATGGTATCATGGACTTGATGAATGGACAAGATGAATACAATTATGAGAATGAACTTACCAATAAGCAATGGGCTGAAGCTGGCACTTTACTTGGTGATTGTCTCCTTTCATCTGTCAAGGTCCTTATGAATCTGACAAATGACAATCCCATTGGTTGTCACCAAGTGGCAGTTTGTGGAGGGCTAGATACAATGGCTTCATTGATTGTTGATCATT

Fln Alignment:

biogeco3_mira_c4227___NYENELTNKQWAEAGTLLGDCLLSSVKVLMNLTNDNPIGCHQVAVCGGLDTMASLIVDH
B4F8S5__________________NQSGATSDSKAADESNLLEDCLLASVKVLMNLANDNPSGCEQIASCGGINTMASLIIKH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain