SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene13212

Length: 756 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene13212 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17798	7/7

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Methylesterase n=1 Tax=Solanum lycopersicum RepID=Q6ED34_SOLLC	-	-	4.0e-37	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%
Blast2go	alpha beta hydrolase fold superfamily	-	-	0.0	60%

Source	ECs	Term	Type	e value	Identity
Blast2go	Carboxylesterase.	EC:3.1.1.1	-	0.0	60%

Source	KEGGs	Term	Identity
Blast2go	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	60%
Blast2go	Drug metabolism - other enzymes	00983	60%
Blast2go	Metabolic pathways	01100	60%
Blast2go	Biosynthesis of secondary metabolites	01110	60%

Source	GOs	Term	Type	Identity
Blast2go	systemic acquired resistance	GO:0009627	Biological Process	60%
Blast2go	salicylic acid metabolic process	GO:0009696	Biological Process	60%
Blast2go	methyl indole-3-acetate esterase activity	GO:0080030	Molecular Function	60%
Blast2go	methyl salicylate esterase activity	GO:0080031	Molecular Function	60%
Blast2go	methyl jasmonate esterase activity	GO:0080032	Molecular Function	60%

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
275	66		33		0.997452
364	25		75		0.996473
366			25	75	0.996473
367		75		25	0.996473
438			66	33	0.997452
466	33	66			0.997452
470	66			33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain