SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene13112

Length: 811 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene13112 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2833	9/9

Source	Descriptions	Term	Type	Identity
AutoFact	Deaminase n=3 Tax=Andropogoneae RepID=B6TRX4_MAIZE	-	-	60%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	61%
Blast2go	adenosine deaminase-like	-	-	75%

Source	GOs	Term	Type	Identity
Blast2go	purine ribonucleoside monophosphate biosynthetic process	GO:0009168	Biological Process	75%
Blast2go	deaminase activity	GO:0019239	Molecular Function	75%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	75%

Source	InterPros	Term	Type	e value	Identity
Sma3	Adenosine/AMP deaminase domain	IPR001365	-	0.0	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9P4P9

Fln msg: Distance to subject end: 38 aas, your sequence is shorter than subject: 269 - 363

Fln protein: AGMLLFNLIHVLTTDHGTISRVAKEVIEDFAAENVIYLELRTTPKKNEAIGMSKRSYVEAVLAGFKAVETVETIFLPIDGNIQHIVPLVQENGSAKGPRMCQIFVRLLLSIDRRENLDGAMETVQLALDMRNSGVVGIDLSGNPIVGEWQTFLPALTWARNQGLPITLHCGEVPNRQEIQGMLDFHPERLGHVCCLDDLEWKTLKASDIPVEVCLTSNVRTECVTSIADHHFADLYQEKHPLILCTDDPGVFSTTISCEYALAASCFEL

Protein Length: 270

Fln nts: CTGCAGGAATGCTTCTGTTTAACTTGATCCATGTGCTCACCACGGACCATGGTACCATTAGTAGAGTTGCTAAAGAAGTTATTGAAGACTTTGCAGCAGAAAATGTCATTTACTTGGAGCTACGCACAACACCAAAGAAGAATGAAGCTATAGGTATGAGTAAGCGTTCATATGTGGAAGCAGTTCTTGCTGGGTTCAAGGCAGTAGAAACAGTGGAAACAATTTTTCTGCCTATCGACGGAAATATTCAACATATTGTTCCACTTGTGCAAGAAAATGGTTCAGCCAAAGGGCCTAGAATGTGCCAAATATTTGTCCGCTTGCTTTTAAGTATAGATCGTCGTGAGAATTTAGATGGAGCGATGGAAACAGTTCAGCTAGCTTTAGATATGAGGAACTCGGGTGTAGTTGGCATTGATCTTTCAGGGAACCCTATAGTTGGAGAATGGCAGACATTCTTACCGGCTTTGACGTGGGCCAGAAACCAGGGGCTTCCTATTACTCTTCATTGTGGAGAGGTACCAAACCGGCAGGAAATTCAGGGTATGCTGGACTTTCATCCCGAGAGACTTGGTCATGTGTGCTGCCTTGATGATCTTGAATGGAAAACATTGAAGGCATCAGATATCCCGGTTGAGGTTTGCTTGACATCGAATGTCCGTACGGAATGTGTCACTTCAATAGCCGACCATCATTTTGCTGATCTGTACCAGGAAAAACATCCCTTGATCTTGTGCACAGACGATCCAGGTGTCTTCTCCACTACAATCTCTTGTGAATATGCTCTGGCTGCTTCATGTTTTGAACTCAC

Fln Alignment:

biogeco3_mira_c811___LFNLIHVLTTDHGTISRVAKEVIEDFAAENVIYLELRTTPKKNEAIGMSKRSYVEAVLAGFKAVETVETIFLPIDGNIQHIVPLVQENGSAKGPRMCQIFVRLLLSIDRRENLDGAMETVQLALDMRNSGVVGIDLSGNPIVGEWQTFLPALTWARNQGLPITLHCGEVPNRQEIQGMLDFHPERLGHVCCLDDLEWKTLKASDIPVEVCLTSNVRTECVTSIADHHFADLYQEKHPLILCTDDPGVFSTTISCEYALAASCFEL
B9P4P9__________________LFDLIHILTTDHKTVTRITKEVVEDFASENVVYLELRTTPKKNDSIGMSKHSYMEAVVEGLRAVTAVDIDFVPHKFNTQDSLNSIAMNDACDGTKKKKIYVRLLLSIDRRETTEAAIETVKLALEMRDLGVVGIDLSGNPVVGEWNTFLPALKFAQEQGLYITLHCGEVLNCQEVQPMLDFLPQRIGHAIFFEEEEWRQLKTSKIPVEICLTSNIKTESISSIDIHHFVDLYNAKHPLVLCTDDAGVFSTSLSNEYKLASTAFGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain