SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene12175

Length: 994 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene12175

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17044	15/128
SustainPine v2.0	sp_v2.0_unigene23508	7/128
SustainPine v2.0	sp_v2.0_unigene23827	3/128
SustainPine v2.0	sp_v2.0_unigene61320	101/128

Source	Descriptions	Term	Type	e value	Identity
AutoFact	orf [Pseudotsuga menziesii] prf\|\|2211386D late embryogenesis abundant protein	-	-	6.0e-08	32%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	49%
Blast2go	late embryogenesis abundant protein	-	-	4.69237e-28	53%

Full-Lengther Next Prediction

SNPs (tot: 25)

Position	A %	C %	G %	T %	Probability
349	12		87		0.992554
353			87	12	0.992554
553			91	8	0.999807
554			91	8	0.999807
577		90		9	0.999872
650	18	81			0.999994
652	18	81			0.999994
653	81			18	0.999994
840		10		90	0.999898
841	10		90		0.999898
842	85			10	0.999793
843		90		10	0.999898
881		90		10	0.90298
882	10	90			0.90298
883	10		90		0.90298
885		90	10		0.90298
886		90		10	0.90298
901	10		90		0.90298
902		10	90		0.90298
903	10		90		0.90298
904	90			10	0.90298
922	56		43		1.0
942	10		90		0.90298
943	88	11			0.923564
957		75		25	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain