SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene12122

Length: 914 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene12122 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18988	41/42
SustainPine v2.0	sp_v2.0_unigene61656	1/42

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Nop14 multi-domain protein	-	-	4.0e-18	32%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Blast2go	unknown [Picea sitchensis]	-	-	0.0	90%

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
197	25			75	0.996473
198		75		25	0.996473
199	75		25		0.996473
227	14			85	0.993533
228		85		14	0.993533
229		85	14		0.993533
580	18		81		0.999994
583	81			18	0.999994
584	81			18	0.999994
781	10			90	0.90298
783	10		90		0.90298
784	90			10	0.90298
785	90			10	0.90298
810	12		87		0.992554
812		87		12	0.992554
831	25			75	0.996473
835			75	25	0.996473
838	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain