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UniGene Name: biog3_v1.0_unigene11932
Length: 207 nt
 UniGene Fasta
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| >biog3_v1.0_unigene11932
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Ace file of the UniGene biog3_v1.0_unigene11932
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
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| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene4919 | 3/3 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | CTR1-like protein kinase [Solanum lycopersicum] gb|AAR89823.1| CTR1-like protein kinase [Solanum lycopersicum] | - | - | 0.0 | 77% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 91% |
| Blast2go | ctr1-like protein kinase | - | - | 0.0 | 84% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Mitogen-activated protein kinase kinase kinase. | EC:2.7.11.25 | - | 0.0 | 84% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | 84% |
| Blast2go | ATP binding | GO:0005524 | Molecular Function | 0.0 | 84% |
| Blast2go | MAP kinase kinase kinase activity | GO:0004709 | Molecular Function | 0.0 | 84% |
| Full-Lengther Next Prediction |
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Fln status: N-terminus
Fln database: coniferopsida.fasta
Fln subject: D5A8V0
Fln msg: Distance to subject end: 271 aas, your sequence is shorter than subject: 47 - 319
Fln protein:
M
Protein Length:
48
Fln nts:
A
Fln Alignment:
Contig11932___MLELPQGTNKMKEGRHDEAGNLLSTKANLQLSLSMDVLEIPWSDLVL
D5A8V0__________________MLELPQGTNKMKEGRHDETDNLLSTKANLELSLSMDGLEIPWSDLVL
| SNPs (tot: 2) |
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| Position | A % | C % | G % | T % | Probability |
|---|---|---|---|---|---|
| 9 | 33 | 33 | 0.997753 | ||
| 11 | 33 | 33 | 33 | 0.997753 |
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
