SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene11426

Length: 1123 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene11426

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9679	316/318

Source	Descriptions	Term	Type	Identity
AutoFact	Ascorbate peroxidase n=3 Tax=Pinaceae RepID=Q6RY58_PINPS	-	-	94%
FL-Next	tr=Ascorbate peroxidase; Pinus pinaster (Maritime pine).	-	-	100%
Blast2go	ascorbate peroxidase	-	-	92%

Source	ECs	Term	Type	e value	Identity
Blast2go	L-ascorbate peroxidase.	EC:1.11.1.11	-	0.0	92%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Ascorbate and aldarate metabolism	00053		0.0	92%
Blast2go	Glutathione metabolism	00480		0.0	92%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	92%
Blast2go	response to oxidative stress	GO:0006979	Biological Process	92%
Blast2go	heme binding	GO:0020037	Molecular Function	92%
Blast2go	L-ascorbate peroxidase activity	GO:0016688	Molecular Function	92%

Source	InterPros	Term	Type	Identity
Sma3	Plant ascorbate peroxidase	IPR002207	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Peroxidase, active site	IPR019794	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: Q6RY58

Fln msg:

Fln protein: MVKAYPTVSEEYKAAIDKCKRKLRALIAEKNCAPIMVRIAWHSAGTYDVKTKTGGPFGTMRYGAELAHGANSGLDIAVRLLEPIKEQFPIISYADFYQLAGVVAVEVTGGPDIPFHPGREDKPEPPPEGRLPDATKGPDHLRDVFGHMGLNDKEIVALSGAHTLGRCHKERSGFEGPWTSNPLIFDNSYFTELVTGEKEGLLQLPSDKALLADPSFAVYVQKYAQDEDAFFADYAEAHLKLSELGFADA*

Protein Length: 251

Fln nts: CGGTGTCACATTGCAAACAATAGATCTTGGTTCGAGTCTCTTAGCTCTCTCCAAAGGAATTTTGTGGGTCATTTGCAAGTGAAGACACC_-_ATGGTGAAGGCTTATCCCACCGTAAGCGAGGAGTACAAGGCTGCCATTGACAAATGCAAGAGGAAGCTCCGAGCTCTCATTGCAGAGAAGAACTGTGCGCCGATCATGGTTCGAATCGCATGGCACAGCGCTGGGACTTACGATGTCAAGACCAAGACCGGAGGGCCCTTCGGGACGATGAGATACGGGGCCGAGCTTGCCCACGGTGCTAACAGCGGTCTGGACATCGCAGTTAGGCTCCTGGAGCCAATCAAGGAACAGTTCCCCATAATCTCCTATGCTGACTTTTATCAGTTGGCTGGTGTGGTGGCTGTTGAAGTGACCGGGGGACCTGACATTCCGTTCCATCCCGGAAGAGAAGACAAGCCTGAGCCTCCTCCAGAAGGTCGGCTTCCTGATGCTACAAAAGGACCTGATCATCTGAGGGATGTTTTTGGTCACATGGGGTTGAATGATAAGGAAATTGTGGCCTTGTCTGGTGCCCACACCTTGGGGAGATGCCACAAGGAGAGATCTGGTTTTGAAGGACCATGGACCTCTAACCCTCTTATCTTTGACAACTCTTACTTCACAGAGCTTGTGACTGGAGAGAAGGAAGGTCTGCTTCAGCTGCCATCTGATAAGGCACTGCTGGCTGATCCTAGTTTTGCAGTTTATGTTCAGAAGTATGCACAGGACGAAGATGCTTTCTTTGCTGACTATGCGGAAGCTCACCTGAAGCTTTCTGAACTGGGGTTTGCTGATGCGTAG___ATTCATTCCTGCTGCAGAGACAATTCCTTGCTACTAGATAGCTTCGTTTTGTATTTCATCTAATCTTTTCCATTATATGGTCACATATAAGTTGGTGTTATGCGCCATAGTAATACTTGAACCTACATGTTTTTGAGAAGTATCGATGTTCTTTTAAATGAACATTGAATACAACATTTTGGAACCTGGTTGTGTTCTATCATGCACATATTTAAATCGAATGCTTCGTTCCTGTTAAAAACTGCAGCCCAATGCGTAGTATGTGGTAATCTATATAATTGGAT

Fln Alignment:

Contig11426___MVKAYPTVSEEYKAAIDKCKRKLRALIAEKNCAPIMVRIAWHSAGTYDVKTKTGGPFGTMRYGAELAHGANSGLDIAVRLLEPIKEQFPIISYADFYQLAGVVAVEVTGGPDIPFHPGREDKPEPPPEGRLPDATKGPDHLRDVFGHMGLNDKEIVALSGAHTLGRCHKERSGFEGPWTSNPLIFDNSYFTELVTGEKEGLLQLPSDKALLADPSFAVYVQKXXXXXXXXXXXXXXXHLKLSELGFADA
Q6RY58__________________MVKAYPTVSEEYKAAIDKCKRKLRALIAEKNCAPIMVRIAWHSAGTYDVKTKTGGPFGTMRYGAELAHGANSGLDIAVRLLEPIKEQFPIISYADFYQLAGVVAVEVTGGPDIPFHPGREDKPEPPPEGRLPDATKGPDHLRDVFGHMGLNDKEIVALSGAHTLGRCHKERSGFEGPWTSNPLIFDNSYFTELVTGEKEGLLQLPSDKALLADPSFAVYVQKYAQDEDAFFADYAEAHLKLSELGFADA

SNPs (tot: 54)

Position	A %	C %	G %	T %	Probability
397	20		80		0.995493
398	20			80	0.995493
399			80	20	0.995493
401		80		20	0.995493
426	16	83			0.994512
429			16	83	0.994512
430		83		16	0.994512
438	11			88	0.923564
439		88		11	0.923564
440		88	11		0.923564
441		88		11	0.923564
467	10	90			0.90298
468	10			90	0.90298
469		90		10	0.90298
470		90	10		0.90298
471	90			10	0.90298
607	4		95		0.997218
608		4	95		0.997218
609	4			95	0.997218
616			94	5	0.997984
677		3	96		0.999929
679			96	3	0.999929
680	96			3	0.999934
681		2	97		0.956062
683	97			2	0.956062
684			95	3	0.99967
688		1	93		1.0
690	3			96	0.999959
693		2	89	7	1.0
694	2	97			0.975753
702			95	4	0.999983
712	97			2	0.975753
718		96		3	0.982166
720	3		96		0.984346
723			96	3	0.984346
750	5			94	0.997984
753	2		89	7	0.999999
754	89	2		7	0.999999
777	6			93	0.999153
801	7			92	0.999664
805		92		8	0.999718
870	13		86		1.0
874	8	82		8	0.999136
877		9	90		0.999872
880	90			9	0.999872
887		6		81	0.999943
1075	7	28		57	1.0
1076		18		81	0.999994
1077	88		11		0.923564
1084			83	16	0.994512
1103	33		66		0.997452
1104		33		66	0.997452
1105	33		66		0.997452
1106			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain