SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene10946

Length: 1420 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene10946

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene60374	55/55

Source	Descriptions	Term	Type	Identity
AutoFact	Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI	-	-	93%
FL-Next	sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	fructose-bisphosphate aldolase	-	-	88%

Source	InterPros	Term	Type	e value	Identity
Sma3	Fructose-bisphosphate aldolase, class-I	IPR000741	-	0.0	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NSH4

Fln msg: your sequence is longer than subject: 399 - 364

Fln protein: MSINSVESLRPEAYSGLQHLLVESIGRSSKRITKMTSRTLSGNSYYGKYAEELIETANYIATPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFTTPGALQYLSGVIFFEETLYQSTTSGKLFVQVLQEAGVVPGIKVDKGTVDLAGTNGETTTQGLDGLAQRCQQYYKAGARFAKWRAVLKIGPSEPSELSIEQNAQGLARYAIICQENGLVPIVEPEILTDGSHDIHKCAAVTEKVVAAVYKALNDHHVLLEGTLLKPNMVTPGTDGPKVPPQQIAEHTVRAFQRTVPAAVPGIVFLSGGQSEEEATLHLNAINARKTQKPWTLSFSFGRALQQSTLKTWGGKAENLGAAQKAFLARCKANSEATLGKYAGGAGAGITTESLHVKDYKY*

Protein Length: 400

Fln nts: A_-_ATGTCCATCAATTCTGTCGAGTCATTGCGGCCTGAAGCATATAGTGGTCTTCAACATCTTCTTGTGGAGAGCATCGGTCGGTCATCGAAGCGGATTACAAAAATGACTAGTCGCACTCTCTCCGGAAATTCTTACTACGGCAAATACGCTGAGGAGTTGATTGAGACTGCCAATTACATTGCAACACCTGGCAAAGGTATCCTTGCAGCGGATGAGAGTACAGGAACCATTGGGAAGCGCCTGTCGAGCATCAACGTGGAGAATGTAGAGGCCAATCGTAGGGCGCTTCGAGAATTGCTCTTTACAACTCCTGGTGCTCTGCAGTATTTGAGTGGAGTTATTTTCTTTGAAGAAACTCTTTACCAGAGCACAACTAGTGGAAAACTTTTTGTCCAGGTCCTTCAGGAAGCAGGAGTGGTGCCCGGTATCAAAGTGGACAAGGGAACAGTAGATTTGGCTGGTACAAATGGGGAAACAACCACACAGGGATTAGATGGGCTTGCTCAAAGGTGCCAGCAGTATTACAAGGCTGGTGCAAGGTTTGCTAAATGGAGGGCAGTATTAAAGATTGGCCCAAGTGAGCCCTCAGAGCTTTCAATTGAACAGAATGCTCAAGGCCTGGCTCGTTATGCAATAATTTGCCAAGAGAATGGTCTGGTTCCGATCGTAGAACCTGAAATTTTGACCGATGGGTCTCATGATATTCATAAATGTGCTGCAGTTACTGAAAAAGTTGTTGCAGCTGTCTACAAAGCTTTGAATGACCATCATGTCCTTTTGGAGGGTACTCTGCTGAAACCCAACATGGTAACGCCTGGGACAGATGGTCCTAAAGTTCCTCCACAGCAAATCGCTGAACACACTGTAAGGGCATTCCAAAGGACCGTTCCAGCTGCAGTTCCTGGCATAGTGTTTCTCTCTGGTGGGCAGAGTGAAGAAGAGGCCACTTTGCACTTGAATGCAATAAATGCACGCAAAACTCAGAAGCCATGGACATTGTCCTTTTCTTTTGGACGAGCGCTGCAGCAGAGCACTCTCAAGACGTGGGGTGGGAAAGCAGAGAATCTCGGAGCTGCACAGAAGGCATTTCTTGCTCGTTGCAAGGCCAATTCTGAAGCAACTCTCGGCAAATATGCTGGAGGTGCTGGTGCTGGGATTACCACGGAAAGCCTACATGTTAAAGATTACAAATACTGA___TTTTTATAATTTAGAATGAAGCCATGAACTCCACTGTAATAGTGATGACCCTATGTTTAGAAGCTTCAGAGGCTATTAGGGAGATAGATTAATACTACTAGGTTAGTGGGTAAAATAAAGTATGTTGATAGAGAAAATGTGACTGAAGTAAAGATTATTATTTTTCTACAGTACTGTAGTGAAGTTGGTTGAGGAATAAAATAGATCATTCTTGCATTTAGG

Fln Alignment:

Contig10946___MTSRTLSGNSYYGKYAEELIETANYIATPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFTTPGALQYLSGVIFFEETLYQSTTSGKLFVQVLQEAGVVPGIKVDKGTVDLAGTNGETTTQGLDGLAQRCQQYYKAGARFAKWRAVLKIGPSEPSELSIEQNAQGLARYAIICQENGLVPIVEPEILTDGSHDIHKCAAVTEKVVAAVYKALNDHHVLLEGTLLKPNMVTPGTDGPKVPPQQIAEHTVRAFQRTVPAAVPGIVFLSGGQSEEEATLHLNAINARKTQKPWTLSFSFGRALQQSTLKTWGGKAENLGAAQKAFLARCKANSEATLGKYAGGAGAGITTESLHVKDYKY
A9NSH4__________________MTGRTLSGNSYYGKYSEELIATANYIATPGKGILAADESTGTIGKRLSSINVENVEVNRRSLRELLFTTPGALQYLSGVIFFEETLYQSTASGKPFVEVLQEAGVVPGIKVDKGTVDLAATNGETTTQGLDGLAQRCQQYYKAGARFAKWRAVLKIGPTEPSELSIEQNAQGLARYAIICQENGLVPIVEPEILTDGSHDIHKCAAVTENVVAAVYKALNDHHVLLEGTLLKPNMVSPGTDGPKVPPEEIAEHTVRALQRTVPAAVPGIVFLSGGQSEEEATLNLNAINACKTKKPWTLSFSFGRALQQSTLKTWAGKAENLGAAQKAFLARCKANSEATLGKYAGGAGAGLATESLHVKDYKY

SNPs (tot: 16)

Position	A %	C %	G %	T %	Probability
178			11	88	0.923564
179	88			11	0.923564
1246	14		85		0.993533
1251		85		14	0.993533
1260	12			87	0.992554
1263	87			12	0.992554
1280		28		71	1.0
1282			71	28	1.0
1283			71	28	1.0
1359		20		80	0.995493
1379	25		75		0.996473
1380		25		75	0.996473
1382			75	25	0.996473
1413	33			66	0.997452
1414	33	66			0.997452
1415	33	33			0.997753

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain