SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene10135

Length: 617 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene10135 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17096	4/4

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Contains similarity to gb\|Y13720 Hap2a transcription factor from Arabidopsis thaliana	-	-	1.0e-30	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Blast2go	nuclear transcription factor y subunit a-7-like isoform 1	-	-	0.0	75%

Source	InterPros	Term	Type	e value	Identity
Sma3	CCAAT-binding factor, conserved site	IPR018362	-	0.0	-
Sma3	CCAAT-binding transcription factor, subunit B	IPR001289	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
17		33	66		0.997452
18	33			66	0.997452
45		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain