SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene9698

Length: 926 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene9698

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene21818	10/10

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA	-	-	96%
FL-Next	sp=Cytochrome P450 750A1; Pinus taeda (Loblolly pine).	-	-	89%
Blast2go	cytochrome p450 monooxygenase cyp736b	-	-	70%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3		IPR017973	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q50EK4

Fln msg: Overlapping hits, possible frame ERROR between 338 and 296, Distance to subject end: 115 aas, your sequence is shorter than subject: 308 - 525

Fln protein: DLIFASRPLTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTVKRIESFKHVRQEELSAMIHSICEESKSGRIAVNVSKAISTSLANILWRILAxxxxxxxxxxxxxxxxADLVVEVSIAVGSLTLETSFLTLDCLDLQGIKRALKKANARFDVFAEKMVDEHINASTIRNGEADAECHVKDIIDVLLEMAKNDNTEAKVTREIIKAITYELFSAGMETSANVLEWTMSELLRHPHAMKKLQQEIESVVGQQGIVKESDLASMVYLHCVVKETLRLYPSLPLALPHESVEAVTVGGYYIPKKTIH

Protein Length: 309

Fln nts: ATGATTTGATATTTGCCAGCCGACCTCTAACATCGGTAGGAAAATATTTCTTCTATAACTTCAAAGATATTGCCTTCAGTCCTTATGGAGATCACTGGAGGAAAATGAGAAAAATATGCGTGTTAGAACTGCTCACTGTCAAAAGAATCGAGTCCTTCAAGCATGTGCGACAGGAGGAACTGTCTGCGATGATCCATTCCATTTGTGAAGAGAGTAAGAGTGGCAGGATTGCCGTGAATGTGAGCAAGGCCATCTCTACTTCTCTAGCGAATATACTTTGGCGAATACTGGCGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCGGATCTGGTGGTCGAGGTGTCCATTGCGGTCGGAAGTTTAACATTGGAGACTTCATTCCTTACTTTGGATTGCCTTGATTTGCAAGGTATCAAGCGGGCCCTAAAGAAGGCCAACGCAAGATTTGATGTATTCGCTGAGAAAATGGTAGATGAACATATTAATGCCTCCACCATCAGAAATGGTGAGGCAGATGCAGAGTGTCATGTTAAAGATATCATCGATGTGCTCCTTGAGATGGCCAAGAACGATAATACGGAGGCAAAAGTTACACGTGAAATAATCAAGGCAATTACATATGAGTTGTTTTCTGCTGGAATGGAGACATCGGCAAACGTGTTAGAATGGACCATGAGTGAGCTGCTAAGACATCCTCATGCAATGAAGAAATTGCAGCAAGAAATTGAATCCGTCGTTGGCCAACAAGGTATAGTAAAGGAGTCGGATCTGGCAAGCATGGTATACCTCCATTGTGTCGTGAAAGAGACCCTACGGCTATACCCATCGTTGCCGCTAGCGCTTCCCCACGAGTCTGTAGAGGCTGTCACAGTTGGGGGGTACTATATACCAAAGAAAACAATACATT

Fln Alignment:

Contig9698___DLIFASRPLTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTVKRIESFKHVRQEELSAMIHSICEESKSGRIAVNVSKAISTSLANILWRILARxxxxxxxxxxxxxxFADLVVEVSIAVGSLTLETSFLTLDCLDLQGIKRALKKANARFDVFAEKMVDEHINASTIRNGEADAECHVKDIIDVLLEMAKNDNTEAKVTREIIKAITYELFSAGMETSANVLEWTMSELLRHPHAMKKLQQEIESVVGQQGIVKESDLASMVYLHCVVKETLRLYPSLPLALPHESVEAVTVGGYYIPKKTI
Q50EK4_________________DLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARxxxxxxxxxxxxxxFADLVVEVSIAVGSLNIGDFIPYLDCLDLQGIKRALKKANARFDAFAEKMIDEHINASTIRNGEADAGCHVKDIIDVLLEMAKNDNTGAKVTREIIKAITYELFSAGMETSANVLEWAMSELLRHPHAMKKLQQEIESVVGQQGTVKESDLASIVYLHCVVKETLRLYPSLPLALPHESLEAVTVGGYYIPKKTM

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
207			33	66	0.997452
217	66		33		0.997452
222		33		66	0.997452
646	20			80	0.995493
647		20	80		0.995493
700			75	25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain