SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene9511

Length: 352 nt

UniGene Fasta

>biog3_v1.0_unigene9511
AATGTTGAAGTGGTTTGAAGAATATCCAGAGTTCATTTCAAATCCGTTCTATATTAGCGGAGAATCATATGCAGGAATCTACGTTCCAACTCTAGCGTCAGAGGTGGTCAAGGGAATTGAAGGTGGGGTAAAACCTGTTTTGAATTTTAAGGGTTACACAATAGGAAATGGGGTTGCAGACACAAAATTTGATGGCAATGCGCTTGTACCGTTTGCTCATGGAATGGCGCTTATATCGGACGAACAATATCAAGAAGCGTTCAATGCTTGTAATGGGAACTATTATGATGTCGAAGATGCTGATTGTGAAAGCAAACTAGAAGCGATAAACGAGGCGGTTTCAAGAATTAAC

Ace file of the UniGene biog3_v1.0_unigene9511

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene19993	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	wound-inducible carboxypeptidase [Solanum lycopersicum]	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	72%
Blast2go	serine carboxypeptidase-like protein	-	-	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuole	GO:0005773	Cellular Component	0.0	77%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase S10, serine carboxypeptidase	IPR001563	-	0.0	-
Sma3	Peptidase S10, serine carboxypeptidase, active site	IPR018202	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PRA0

Fln msg: Distance to subject end: 28 aas, your sequence is shorter than subject: 117 - 303

Fln protein: MLKWFEEYPEFISNPFYISGESYAGIYVPTLASEVVKGIEGGVKPVLNFKGYTIGNGVADTKFDGNALVPFAHGMALISDEQYQEAFNACNGNYYDVEDADCESKLEAINEAVSRIN

Protein Length: 118

Fln nts: AATGTTGAAGTGGTTTGAAGAATATCCAGAGTTCATTTCAAATCCGTTCTATATTAGCGGAGAATCATATGCAGGAATCTACGTTCCAACTCTAGCGTCAGAGGTGGTCAAGGGAATTGAAGGTGGGGTAAAACCTGTTTTGAATTTTAAGGGTTACACAATAGGAAATGGGGTTGCAGACACAAAATTTGATGGCAATGCGCTTGTACCGTTTGCTCATGGAATGGCGCTTATATCGGACGAACAATATCAAGAAGCGTTCAATGCTTGTAATGGGAACTATTATGATGTCGAAGATGCTGATTGTGAAAGCAAACTAGAAGCGATAAACGAGGCGGTTTCAAGAATTAAC

Fln Alignment:

Contig9511___MLKWFEEYPEFISNPFYISGESYAGIYVPTLASEVVKGIEGGVKPVLNFKGYTIGNGVADTKFDGNALVPFAHGMALISDEQYQEAFNACNGNYYDVEDADCESKLEAINEAVSRIN
C0PRA0_________________LLKWFEEYPEFLSNPFYISGESYAGIYVPTLGSEVVKGIEARVTPILNFKGYMVGNGVTDNIFDGNALVPFVHGMALISEVQFQDAVDACKGKYYDTVDSICDTKLAAIDQEVSRLN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain