SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene8861

Length: 813 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene8861 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10239	8/9
SustainPine v2.0	sp_v2.0_unigene35006	1/9

Source	Descriptions	Term	Type	Identity
AutoFact	ABC-type transport system-like (ISS) [Ostreococcus tauri] emb\|CAL53419.1\| ABC-type transport system-like (ISS) [Ostreococcus tauri]	-	-	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	abc-type transport system involved in resistance to organic periplasmic component	-	-	81%

Source	GOs	Term	Type	Identity
Blast2go	intracellular lipid transport	GO:0032365	Biological Process	81%
Blast2go	lipid transporter activity	GO:0005319	Molecular Function	81%
Blast2go	phospholipid binding	GO:0005543	Molecular Function	81%
Blast2go	chloroplast inner membrane	GO:0009706	Cellular Component	81%

Source	InterPros	Term	Type	Identity
Sma3	Aminotransferase, class-II, pyridoxal-phosphate binding site	IPR001917	-	-
Sma3	Mammalian cell entry-related	IPR003399	-	-
Sma3	Peptidase S10, serine carboxypeptidase, active site	IPR018202	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain