SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene8763

Length: 655 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene8763 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6711	10/10

Source	Descriptions	Term	Type	Identity
AutoFact	DUF639 domain containing protein	-	-	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	33%
Blast2go	uncharacterized protein	-	-	73%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF639	IPR006927	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
421	14	85			0.993533
422	14	85			0.993533
424			14	85	0.993533
425		85		14	0.993533
458	14			85	0.993533
459	14			85	0.993533
461		85	14		0.993533
462	85			14	0.993533
512	20			80	0.995493
513		20	80		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain