SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene8640

Length: 1080 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene8640

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3382	10/10

Source	Descriptions	Term	Type	Identity
AutoFact	PREDICTED: similar to ATPANK2 (PANTOTHENATE KINASE 2); pantothenate kinase n=1 Tax=Vitis vinifera RepID=UPI000198529D	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	pantothenate kinase 2-like	-	-	88%

Source	ECs	Term	Type	e value	Identity
Blast2go	Pantothenate kinase.	EC:2.7.1.33	-	0.0	88%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Pantothenate and CoA biosynthesis	00770		0.0	88%
Blast2go	Metabolic pathways	01100		0.0	88%

Source	GOs	Term	Type	Identity
Blast2go	coenzyme A biosynthetic process	GO:0015937	Biological Process	88%
Blast2go	phosphorylation	GO:0016310	Biological Process	88%
Blast2go	protein binding	GO:0005515	Molecular Function	88%
Blast2go	ATP binding	GO:0005524	Molecular Function	88%
Blast2go	pantothenate kinase activity	GO:0004594	Molecular Function	88%

Source	InterPros	Term	Type	Identity
Sma3	Domain of unknown function DUF89	IPR002791	-	-
Sma3	Type II pantothenate kinase	IPR004567	-	-
Sma3	Pantothenate kinase, bacterial	IPR011602	-	-
Sma3	Pantothenate kinase, acetyl-CoA regulated, two-domain type	IPR015844	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PQ15

Fln msg: your sequence is shorter than subject: 322 - 895

Fln protein: AFARAFRAHLARLMEEPAAYGKLGLANLLELREECLREFHFSDAYKTIKQRENEASLAVLPDLLMELDSMDEEKRLLALIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRKKMQRPWRVDNFDMFKKRMLGSGKEKPKPHKRALLFVDNSGADIVLGMLPLTRELLRRGTEVVLVANSLPALNDVTASELPNIVAEAAKHCDILRKAAEAGELLVDAMATDREDTVKNVSSVPRLMVVENGCGSPCIDFRQVSSDLAAAANEADLVILEGMGHTLHTNYNARFKCDALKLAMVKNQRLAEKIVNGNIYDCICRYEPAA*

Protein Length: 323

Fln nts: ATGCTTTTGCTCGTGCATTTCGGGCTCACCTTGCAAGGTTAATGGAGGAACCCGCAGCTTATGGAAAGTTGGGCTTGGCCAACCTATTGGAGCTCAGGGAGGAATGTTTGAGAGAATTTCACTTCTCAGATGCATATAAAACAATTAAACAAAGGGAAAATGAAGCATCACTTGCTGTTTTACCAGATCTTTTAATGGAGCTCGATAGCATGGATGAGGAGAAGAGATTGCTAGCTCTTATTGAAGGTGTCCTTGCTGCTAACATCTTTGATTGGGGTTCGCGTGCTTGTGTTGATCTGTACCATAAAGGCACAATTATTGAAATCTATCGCATGAGTCGCAAAAAGATGCAACGTCCCTGGCGGGTGGATAATTTTGATATGTTCAAAAAAAGAATGTTGGGGTCTGGAAAAGAGAAGCCCAAACCACATAAACGAGCACTTCTATTTGTAGACAACTCCGGTGCTGACATTGTCCTTGGGATGTTGCCTCTAACACGTGAACTTCTTCGTCGTGGGACAGAGGTTGTCCTTGTTGCAAATTCCCTCCCTGCTCTTAATGATGTGACTGCAAGTGAACTTCCTAATATTGTGGCTGAAGCAGCAAAGCATTGCGACATTTTACGTAAAGCTGCTGAAGCAGGAGAACTGCTAGTGGATGCAATGGCCACTGATCGGGAAGACACTGTGAAAAATGTCTCTTCTGTGCCTCGTCTAATGGTGGTTGAAAATGGTTGTGGAAGTCCATGCATAGACTTCCGACAAGTAAGCTCAGATTTAGCTGCTGCTGCAAATGAGGCAGACCTGGTCATTTTGGAAGGAATGGGTCACACTTTGCATACAAACTACAATGCTCGTTTTAAATGCGATGCCCTTAAGCTTGCAATGGTGAAGAACCAGAGACTGGCTGAGAAAATCGTGAATGGAAATATTTATGATTGTATCTGCCGGTATGAACCAGCGGCATGA___TCACATTGTAATTTCCAAGATTTGAGAATAAGTCGTGCTCAGAAATCCCTCATCTGCTTCATCGATTCGCATGCCGCTTTTCTTCATTCTTTGGTGCTAATTCCATATTTTT

Fln Alignment:

Contig8640___MEEPAAYGKLGLANXXXXXXXXXXXFHFSDAYKTIKQRENEASLAVLPDLLMELDSMDEEKRLLALIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRKKMQRPWRVDNFDMFKKRMLGSGKEKPKPHKRALLFVDNSGADIVLGMLPLTRELLRRGTEVVLVANSLPALNDVTASELPNIVAEAAKHCDILRKAAEAGELLVDAMATDREDTVKNVSSVPRLMVVENGCGSPCIDFRQVSSDLAAAANEADLVILEGMGHTLHTNYNARFKCDALKLAMVKNQRLAEKIVNGNIYDCICRYEPA
C0PQ15_________________MEEPAAYGKLGLANLLELREECLREFHFSDAYKTIKQRENEASLAVLQDLLMELDSMDEEKRLLALIEGVLAANIFDWGSRACVELYHKGTIIEIYRMSRKKMQRPWRVDNFDTFKERMLGSGGEKPKPHKRALLFVDNSGADIVLGMLPLTRELLRRGTEVVLVANSLPALNDVTASELPNIVAEAAKHCDILRKAAEAGGLLVDAMVTDREESVQNVSSVPRLMVVENGCGSPCIDFRQVSSDLAAAANEADLVILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKIVNGNIYDCICRYEPA

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
831	50		50		1.0
832		50		50	1.0
833	50		50		1.0
834		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain