SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene8561

Length: 911 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene8561 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene4676	6/6

Source	Descriptions	Term	Type	Identity
AutoFact	RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb\|AAX07433.1\| cytochrome P450 CYPC [Pinus taeda]	-	-	41%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	85%
Blast2go	cytochrome p450 monooxygenase cyp736b	-	-	75%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	75%
Blast2go	heme binding	GO:0020037	Molecular Function	75%
Blast2go	monooxygenase activity	GO:0004497	Molecular Function	75%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	75%

Source	InterPros	Term	Type	Identity
Sma3	Protease inhibitor I4, serpin	IPR000215	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Zinc finger, CCHC-type	IPR001878	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	Lipoxygenase, C-terminal	IPR013819	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PQV6

Fln msg: Separated hits, possible frame ERROR between 665 and 671, your sequence is shorter than subject: 267 - 517

Fln protein: LKNIHKIQDDLLEKILEEHFSQNNPNAMPDLVDVLLAASADENLGFQITRDNIKSLIYDMFSAGSATSSASIAWAISELLRNPPVMKKLQDELERVVGMGRMVQESDLPRLVYLQAVVKEMLRLHPPGPLLLPHISMETCHVLGFEIPSGTRLVVNAWAIGRNPRSWGEDAECFKPERFMEEGFLDTKVENFEWIPFGAGRRACPAQEMAMIVVEFAVAQxxxCFNWRLPDDMNEEKLDMSEKNEGITVSRAKDLFAVPTPRLSVL*

Protein Length: 268

Fln nts: GATTGAAGAACATACACAAGATCCAAGACGACTTGTTAGAGAAGATACTAGAGGAACACTTTTCGCAGAATAACCCCAACGCCATGCCAGATCTTGTGGATGTTTTGCTGGCCGCCTCAGCGGATGAGAATTTGGGGTTCCAAATCACGCGAGATAATATAAAATCTCTCATTTATGATATGTTTTCCGCTGGGTCGGCTACATCCTCTGCCAGCATAGCGTGGGCAATCTCCGAATTGCTAAGAAACCCGCCAGTGATGAAGAAACTTCAGGACGAGCTGGAACGCGTAGTTGGAATGGGGCGCATGGTACAAGAATCTGATCTGCCTCGTCTCGTTTATTTACAAGCTGTGGTCAAAGAAATGCTCAGACTTCACCCGCCGGGGCCTTTATTACTTCCCCACATATCAATGGAAACGTGCCATGTGTTGGGCTTCGAAATCCCTAGCGGAACTCGGCTTGTGGTGAACGCGTGGGCAATTGGAAGGAACCCAAGGTCATGGGGCGAGGATGCTGAATGTTTCAAGCCGGAGAGATTCATGGAAGAAGGGTTCCTGGACACCAAAGTGGAAAATTTTGAGTGGATTCCTTTCGGAGCGGGCCGGAGAGCATGCCCCGCACAAGAAATGGCAATGATTGTTGTAGAGTTTGCTGTGGCGCAGCTxxxxxxGTGTTTCAATTGGAGGCTTCCCGATGATATGAATGAAGAAAAATTGGACATGTCTGAAAAGAATGAAGGAATTACGGTATCCCGGGCAAAGGATCTCTTTGCTGTTCCAACTCCTCGGCTTTCGGTACTGTAATTGTTGATGTATGTATATATTGCTACAACTCCTCGGATTTCCGTACTGTAATTGTTGATGTATGTATATATTGCTACCACTCCTCGGCTTTCCGTATTGTTAAAACATT

Fln Alignment:

Contig8561___LKNIHKIQDDLLEKILEEHFSQNNPNAMPDLVDVLLAASADENLGFQITRDNIKSLIYDMFXXXXXXXXXXXXXXXSELLRNPPVMKKLQDELERVVGMGRMVQESDLPRLVYLQAVVKEMLRXXXXXXXXXXHISMETCHVLGFEIPSGTRLVVNAWAIGRNPRSWGEDAECFKPERFMEEGFLDTKVENFEWIPFGAGRRACPAQEMAMIVVEFAVAQLxxCFNWRLPDDMNEEKLDMSEKNEGITVSRAKDLFAVPTPRLSVL
C0PQV6_________________LKNIHKTQDALLEKIVEEHFSQNKPNAMPDLLDVLLAASADENLGLQITRDNIKSAVYDILSAGSDTSSTSIEWAMSEVLRNPPVLKKIQEELERVVGMGRMVHESDLPRLVYLQAVVKETLRLHPPGPLLLPHISIETCNVLGYKIPSGTRLLVNVWAIGRNPKSWGEDAESFKPERFMEAGFLDAKVENFEWIPFGAGRRGCPGQQMAMIVVEFAVAQLxxCFNWRLPDDMDEQKLDMSEKNHGITVSRAHELFAVPTPRLPVL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain