SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene8121

Length: 588 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene8121 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3320	5/5

Source	Descriptions	Term	Type	Identity
AutoFact	RecName: Full=Probable NADH dehydrogenase, chloroplastic/mitochondrial; Flags: Precursor	-	-	62%
FL-Next	Isoform 2 of Probable NADH dehydrogenase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDC1	-	-	52%
Blast2go	nadh dehydrogenase	-	-	75%

Source	ECs	Term	Type	e value	Identity
Blast2go	NADH dehydrogenase.	EC:1.6.99.3	-	0.0	75%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Oxidative phosphorylation	00190		0.0	75%
Blast2go	Metabolic pathways	01100		0.0	75%

Source	GOs	Term	Type	Identity
Blast2go	NADH dehydrogenase activity	GO:0003954	Molecular Function	75%
Blast2go	plastoglobule	GO:0010287	Cellular Component	75%
Blast2go	intrinsic to mitochondrial inner membrane	GO:0031304	Cellular Component	75%
Blast2go	cell wall	GO:0005618	Cellular Component	75%

Source	InterPros	Term	Type	Identity
Sma3	Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain	IPR001327	-	-
Sma3	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	IPR013027	-	-
Sma3	Alpha/beta hydrolase fold-3	IPR013094	-	-

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain