SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene8108

Length: 798 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene8108 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2	2/7
SustainPine v2.0	sp_v2.0_unigene22339	5/7

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Molybdopterin synthase sulfur carrier subunit [Arabidopsis thaliana] ref\|NP_849354.1\| Molybdopterin synthase sulfur carrier subunit [Arabidopsis thaliana] ref\|NP_001078366.1\| Molybdopterin synthase sulfur carrier subunit [Arabidopsis thaliana] sp\|Q9S7A3.1	-	-	5.0e-19	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%
Blast2go	molybdopterin synthase sulfur carrier subunit	-	-	0.0	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	molybdenum incorporation into molybdenum-molybdopterin complex	GO:0018315	Biological Process	0.0	71%
Blast2go	auxin mediated signaling pathway	GO:0009734	Biological Process	0.0	71%

Source	InterPros	Term	Type	Identity
Sma3	Beta-grasp domain	IPR012675	-	-
Sma3	Molybdopterin converting factor, subunit 1	IPR010034	-	-
Sma3	ThiamineS	IPR003749	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
112	75			25	0.996473
372	66	33			0.997452
374	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain