SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene7529

Length: 647 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene7529 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2107	3/6
SustainPine v2.0	sp_v2.0_unigene27719	3/6

Source	Descriptions	Term	Type	e value	Identity
AutoFact	zinc finger protein 311 [Homo sapiens]	-	-	7.0e-30	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	32%
Blast2go	zinc finger protein 311	-	-	0.0	59%

Source	GOs	Term	Type	Identity
Blast2go	nucleic acid binding	GO:0003676	Molecular Function	59%
Blast2go	protein binding	GO:0005515	Molecular Function	59%
Blast2go	zinc ion binding	GO:0008270	Molecular Function	59%
Blast2go	intracellular	GO:0005622	Cellular Component	59%

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
86	33	66			0.997452
89		66	33		0.997452
90	80			20	0.995493
93		80	20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain