SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene7271

Length: 791 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene7271

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15638	24/24

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Os05g0432700 protein n=3 Tax=Oryza sativa RepID=Q6I5U6_ORYSJ	-	-	6.0e-22	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	pi starvation-induced protein	-	-	0.0	76%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase S8, subtilisin-related	IPR015500	-	0.0	-
Sma3	Proteinase inhibitor I9	IPR010259	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 25)

Position	A %	C %	G %	T %	Probability
131	33		66		0.997452
132	66			33	0.997452
133	66		33		0.997452
134		66		33	0.997452
268	11			88	0.923564
271		88		11	0.923564
285	88			11	0.923564
286			88	11	0.923564
401	12		87		0.992554
402	12	87			0.992554
405			87	12	0.992554
421	87	12			0.992554
446			71	28	1.0
478	80	20			0.995493
480	83			16	0.994512
482	80		20		0.995493
483	80			20	0.995493
508	22			77	0.999999
510	11			88	0.923564
519	11		88		0.923564
520	11			88	0.923564
601	87	12			0.992554
638	22			77	0.999999
639	22		77		0.999999
670	80		20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain