SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene7107

Length: 794 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene7107 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene26493	6/6

Source	Descriptions	Term	Type	Identity
AutoFact	glucosidase 1 [Arabidopsis thaliana] gb\|AEE34653.1\| glucosidase 1 [Arabidopsis thaliana]	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	65%
Blast2go	mannosyl-oligosaccharide glucosidase	-	-	73%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:3.2.1.2-	-	0.0	73%

Source	GOs	Term	Type	Identity
Blast2go	root epidermal cell differentiation	GO:0010053	Biological Process	73%
Blast2go	pollen sperm cell differentiation	GO:0048235	Biological Process	73%
Blast2go	alpha-glucosidase activity	GO:0004558	Molecular Function	73%
Blast2go	plasma membrane	GO:0005886	Cellular Component	73%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	73%

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycoside hydrolase, family 63	IPR004888	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	G %	T %	Probability
328	25		75	0.996473
329	25	75		0.996473
455		75	25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain