SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene6833

Length: 584 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene6833 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2043	6/6

Source	Descriptions	Term	Type	Identity
AutoFact	DUF632 domain containing protein	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	32%
Blast2go	uncharacterized protein	-	-	60%

Source	InterPros	Term	Type	Identity
Sma3	Pumilio RNA-binding repeat	IPR001313	-	-
Sma3	Domain of unknown function DUF632	IPR006867	-	-
Sma3	Domain of unknown function DUF630	IPR006868	-	-
Sma3	Armadillo-like helical	IPR011989	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
244			66	33	0.997452
458	33			66	0.997452
459		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain