SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene6829

Length: 734 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene6829

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15986	19/19

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RNA recognition motif-containing protein [Arabidopsis thaliana] dbj\|BAB09337.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAL59923.1\| unknown protein [Arabidopsis thaliana] gb\|AAM20239.1\| unknown protein [Arabidopsis thaliana] gb\|AAM62467.1\| unkno	-	-	7.0e-21	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Blast2go	rna binding protein	-	-	0.0	82%

Full-Lengther Next Prediction

SNPs (tot: 26)

Position	A %	C %	G %	T %	Probability
150	33	66			0.997452
152			66	33	0.997452
154	66			33	0.997452
183		71		28	1.0
214	71		28		1.0
220		28		71	1.0
231		22		77	0.999999
272	12	87			0.992554
273		12		87	0.992554
274	12	87			0.992554
312		14	85		0.993533
313	14			85	0.993533
321	16	83			0.994512
322		16		83	0.994512
401		50		50	1.0
444		25	75		0.996473
447	25		75		0.996473
448		25	75		0.996473
505	12		87		0.992554
549	14		85		0.993533
550		14	85		0.993533
551	14			85	0.993533
552		85		14	0.993533
631			83	16	0.994512
680	33		66		0.997452
684		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain