SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene6605

Length: 931 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene6605

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene7208	21/24
SustainPine v2.0	sp_v2.0_unigene20320	3/24

Source	Descriptions	Term	Type	Identity
AutoFact	Mitogen activated protein kinase 1 n=2 Tax=Selaginella moellendorffii RepID=D8QQG3_SELML	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	83%
Blast2go	protein	-	-	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	Mitogen-activated protein kinase.	EC:2.7.11.24	-	0.0	83%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	83%
Blast2go	MAP kinase activity	GO:0004707	Molecular Function	83%
Blast2go	ATP binding	GO:0005524	Molecular Function	83%

Source	InterPros	Term	Type	Identity
Sma3	MAP kinase, conserved site	IPR003527	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P1S7

Fln msg: STOP codon was not found. Distance to subject end: 6 aas, your sequence is shorter than subject: 309 - 368

Fln protein: CTNEKVAIKKIGNVFENVIDAMRTLREIKLLRQLAHDNIITLKDIMTPVGRSNFRDVYLVYDLMDTDLHQIIKSSQALTDDHYQYFIYQLLRGLKYLHSANVLHRDLKPSNLLLTANCDLKICDFGLARTNCETGQFMTEYVVTRWYRAPELLLSCDEYGPSIDVWSVGCILAELLGRQPIFPGKDYINQLKLIINVIGSPAEDDLYFVQSQKACSYIKSLPHVPSASLQRLYPQANPTAIDLLDKMLVFDPYKRITVTEALEHPYFSALHDPRLEPSATAPFELDMPDEELRVQELREMVWREMIYYH

Protein Length: 310

Fln nts: AATGTACCAACGAGAAAGTGGCTATTAAGAAGATCGGCAACGTATTCGAGAATGTGATCGATGCCATGAGGACACTTAGGGAAATCAAGCTTCTCAGGCAGCTCGCTCATGATAACATAATTACCTTGAAGGACATCATGACCCCTGTTGGCAGGTCTAATTTCAGGGATGTTTATCTGGTTTATGATCTCATGGATACTGACCTTCACCAGATCATCAAGTCTTCTCAGGCCCTCACTGATGATCACTACCAGTACTTCATCTACCAGTTGCTGCGAGGCCTAAAATATTTGCATTCTGCCAACGTGTTGCATAGAGATTTGAAGCCAAGTAATCTATTATTGACTGCCAATTGTGACCTTAAGATATGTGATTTTGGTTTAGCTCGAACAAACTGTGAGACAGGGCAGTTCATGACTGAATATGTTGTCACTCGATGGTATAGGGCTCCTGAATTGCTTCTGTCCTGTGATGAGTATGGTCCATCTATTGATGTGTGGTCTGTAGGCTGTATTTTGGCAGAGTTGTTGGGTCGACAGCCAATATTCCCTGGTAAGGATTATATCAATCAACTTAAACTGATCATCAATGTTATTGGCAGCCCAGCGGAAGATGATCTTTACTTTGTCCAGAGCCAGAAGGCCTGCAGCTACATAAAATCACTTCCTCATGTTCCCTCTGCTTCTCTGCAACGTTTATATCCTCAGGCAAATCCTACTGCCATCGACCTACTAGATAAGATGCTAGTTTTTGATCCTTACAAGAGGATCACTGTTACAGAGGCTCTTGAGCATCCATACTTCTCTGCATTACATGATCCAAGGCTCGAGCCTTCTGCAACAGCACCTTTTGAATTGGACATGCCTGATGAGGAATTGAGAGTACAGGAATTGAGGGAGATGGTCTGGAGAGAAATGATATATTATCACCC

Fln Alignment:

Contig6605___TNEKVAIKKIGNVFENVIDAMRTLREIKLLRQLAHDNIITLKDIMTPVGRSNFRDVYLVYDLMDTDLHQIIKSSQALTDDHYQYFIYQLLRGLKYLHSANVLHRDLKPSNLLLTANCDLKICDFGLARTNCETGQFMTEYVVTRWYRAPELLLSCDEYGPSIDVWSVGCILAELLGRQPIFPGKDYINQLKLIINVIGSPAEDDLYFVQSQKACSYIKSLPHVPSASLQRLYPQANPTAIDLLDKMLVFDPYKRITVTEALEHPYFSALHDPRLEPSATAPFELDMPDEELRVQELREMVWREMIYYH
A9P1S7_________________TNEKVAIKKIINAFENQTDARRTLREIKLLRLFAHDNIIALKDIMTPACRTNFNDVYLVYDLMDTDLHQIIKSAQVLTDDHCKYFIYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTNCEKGQFMTEYVVTRWYRAPELLLSCEEYGTSIDIWSVGCIFAELLGRKPIFPGKDYINQLKLIVNVLGSPDEDDLDFIESQKARSYIKSLPVTSHASLQRLYPRANPFAISLLDKMLSFDPRKRITVTEALEHPYFSALHDPSLEPSATAPFDLDMPDEELKEEELRDMFINEVLYYH

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
754	16			83	0.994512
755	16			83	0.994512
848			75	25	0.996473
849		75		25	0.996473
868			33	33	0.997753
871	33	66			0.997452
873			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain