SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene6510

Length: 1072 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene6510

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene21048	11/11

Source	Descriptions	Term	Type	Identity
AutoFact	hydroxyacylglutathione hydrolase (EC:3.1.2.6)	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	hydroxyacylglutathione hydrolase mitochondrial-like	-	-	87%

Source	ECs	Term	Type	e value	Identity
Blast2go	Glutathione thiolesterase.	EC:3.1.2.7	-	0.0	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to salt stress	GO:0009651	Biological Process	0.0	87%
Blast2go	glutathione thiolesterase activity	GO:0047951	Molecular Function	0.0	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Beta-lactamase-like	IPR001279	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5ABI2

Fln msg: Separated hits, possible frame ERROR between 357 and 593, your sequence is longer than subject: 303 - 212

Fln protein: MPVSSRGLSAMQYVRLHLTSAARLNSPLKSLAQIVSPTRARGMSSMVAGDGGAKTPKLFFRQLFEKDSSTYTYLLADVEHPDRPAVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVRPTPGHTQGCVTYVTGEGPGQPNPRMAFTGDALLIRGCGRTDFQGGSAEQLYKSVHSKILTLPKDTLLFPAHDYKGHTVTTVEEELLYNPRLSKDMDTFKKIMENLGLSYPKMIDVAVPANMVCGIQDPVKVSSA*

Protein Length: 304

Fln nts: AATGTTGACTCGATTCAATTTAATACACTTTCACATCGCTGATATCAGGGGGGAACAGGTCACAGAAAGAGCTTTTAATAGAAAATCTGGATAAGA_-_ATGCCCGTCAGCAGCAGAGGGCTCTCTGCAATGCAGTACGTTCGGCTCCATTTGACGTCCGCTGCTCGTTTAAACTCCCCACTGAAATCTCTTGCGCAGATCGTATCACCAACTCGCGCCAGAGGGATGTCCAGCATGGTCGCAGGGGATGGCGGGGCAAAGACTCCGAAACTCTTCTTCAGACAGCTATTCGAGAAGGATTCGTCCACGTATACGTACCTTCTTGCTGACGTGGAACACCCGGACAGGCCTGCAGTGTTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGTTCGACCTACTCCTGGTCACACACAAGGGTGTGTAACTTACGTAACAGGTGAAGGCCCTGGCCAGCCTAATCCAAGAATGGCTTTCACTGGAGATGCTCTTTTAATACGTGGCTGTGGTCGCACTGATTTTCAGGGAGGAAGTGCGGAACAACTTTACAAATCTGTGCACTCAAAGATTTTGACATTGCCAAAGGACACATTGCTGTTTCCTGCTCATGATTATAAGGGCCATACAGTCACGACTGTAGAAGAAGAATTGCTCTATAATCCTCGGCTTTCAAAGGATATGGATACATTCAAGAAGATAATGGAAAATCTTGGTCTTTCTTATCCAAAAATGATTGATGTAGCAGTGCCAGCAAATATGGTGTGTGGTATTCAAGATCCAGTGAAAGTGTCAAGTGCATAG___ATGTTCAGGATGCTCAAGATCTAGATTATATTGTTCAGCACGGGCAGATCATTGTTTCAGTTTTACATT

Fln Alignment:

Contig6510___MQYVRLHLTSAARLNSPLKSLAQIVSPTRARGMSSMVAGDGGAKTPKLFFRQLFEKDSSTYTYLLADVEHPDRPAVLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVRPTPGHTQGCVTYVTGEGPGQPNPRMAFTGDALLIRGCGRTDFQGGSAEQLYKSVHSKILTLPKDTLLFPAHDYKGHTVTTVEEELLYNPRLSKDMDTFKKIMENLGLSYPKMIDVAVPANMVCGIQDPVKVSSA
D5ABI2_________________MQYVRLHLTSAARLNSPLKSLAQILSPSRARGMSSMAAGDGVAKAPKLFFRQLFEKDSSTYTYLLADLAHPDKPAVVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVRPTPGHTEGCVTYITGEGPGQPNPRMAFTGDALLIRGCGRTDFQGGSAEQLYKSVHSQIFTLPKDTLLFPAHDYKGQTVTTVEEELLYNPRLSKDMDTFKNIMGNLGLAYPKMIDVAVPANMVCGFQDPVKVSSA

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
303	33	66			0.997452
305		66		33	0.997452
390		33		66	0.997452
391	33	66			0.997452
427	33			66	0.997452
573	25			75	0.996473
574	25			75	0.996473
575			75	25	0.996473
577		75		25	0.996473
608	25		75		0.996473
609		25	75		0.996473
610	25			75	0.996473
611		75		25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain