SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene6321

Length: 1845 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene6321

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3386	46/46

Source	Descriptions	Term	Type	Identity
AutoFact	RecName: Full=Cytochrome P450 77A1; AltName: Full=CYPLXXVIIA1; AltName: Full=Cytochrome P-450EG6 emb\|CAA50647.1\| P450 hydroxylase [Solanum melongena]	-	-	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	58%
Blast2go	cytochrome p450	-	-	72%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	72%
Blast2go	heme binding	GO:0020037	Molecular Function	72%
Blast2go	monooxygenase activity	GO:0004497	Molecular Function	72%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	72%
Blast2go	oxygen binding	GO:0019825	Molecular Function	72%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Inorganic pyrophosphatase	IPR008162	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LLH0

Fln msg: Separated hits, possible frame ERROR between 606 and 789, your sequence is longer than subject: 377 - 327

Fln protein: MALYGAHCAGTWCLSC*PPHA*RISAGFAIGPSSGSSRGWKPxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRPLFARQWKHIRKWRRIQMESILPLINARRAVLKQGLHTQPGSPDGANAYIDSLMKLELPECRETH**RISYPLFRAPDRRN*HNSYYLGMGNASHGDASRYSRDALSRDLQCRG*QESGGQGH*QPSILERRGEGDPETTPSGSLRPVTLSHRGLQAQGLRHSLPMQSGDLHGMDVV*SEHLAGSHDFQSPAIPGPE*RSRYHGQQAGEDDALWGGPEDLPRPRAGDPAHQSYFGPHGAGLSLVLPGR*DSRSL*EVCVYCCNDESAPGMH*

Protein Length: 378

Fln nts: AATGTCATATAAAAGGCAGAGTGGCCTTAATTGGCAAGCCAGAGGATGAACCAGTAGATATGGAGGTGGGCATGAAGGAAATGTGGTCTGAGTTTGCAGGCGGCCATGGAAGTTACCATGGTCTTGTGGGTGTGGGGATAATAGTGGTTTCTCTGGCAGTGGCAGTCCTATTTTTGAAGAGTAGGCCTCTGAAGAAGCATCTGCCTCCAGGGCCCAGGGGATGGCCTCTTGTTGGGAACCTGTTTCAGGTTGTATTCTCTGGGAAACCCTTCATGTATGTGATTCGAGACCTGAGAGAGAAGTTCGGCCCCATTTTCACCCTCAAAATGGGGCAGAAGACTATGATAATCATCACCTGCCCGGAGGTAGCGCATGAGGCCCTAATCGAAAATGGGGCACTCTTCGCCAGCAGGCCGCCTGATACCCCAACAAAGATGTTCTTCAGCGAGAACAAGTGTTCTATAAATTCGGCCTTGT_-_ATGGCCCTGTATGGCGCACACTGCGCCGGAACATGGTGTCTGAGTTGCTAACCCCCTCACGCATGAAGGATTTCAGCTGGATTCGCGATTGGGCCATCAAGCGGCTCATCCAGAGGCTGGAAGCCGAGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGGCCGCTGTTCGCCAGACAATGGAAGCACATCAGGAAGTGGCGGCGGATCCAGATGGAGAGCATTCTCCCTCTCATCAATGCCCGCCGCGCGGTTCTGAAACAGGGGCTTCATACCCAGCCCGGGTCCCCTGATGGCGCCAATGCATATATTGACTCGCTAATGAAGCTAGAGCTGCCGGAATGTAGGGAAACCCACTGATGAAGAATTAGTTACCCTTTGTTCCGAGCTCCTGACCGCCGGAACTGACACAACAGCTACTACCTTGGAATGGGCAATGCTTCGCATGGTGATGCATCAAGATATTCAAGAGACGCTCTATCAAGAGATCTGCAATGTCGTGGGTGACAGGAAAGTGGAGGACAAGGACATTGACAACCTTCCATACTTGAACGCCGTGGTGAAGGAGACCCTGAGACGACACCCTCCGGGTCACTTCGTCCTGTCACACTCAGTCACAGAGGATTGCAAGCTCAGGGGCTACGACATTCCCTACCAATGCAATCTGGAGATTTACACGGCATGGATGTCGTTTGATCCGAGCATTTGGCCGGATCCCATGACTTTCAATCCCCAGCGATTCCTGGACCCGAATAACGAAGTAGATATCACGGGCAACAAGCAGGTGAAGATGATGCCCTTTGGGGTGGGCCGGAGGATTTGCCCCGCCCTAGGGCTGGGGACCCTGCACATCAATCTTATTTTGGCCCGCATGGTGCAGGCCTTTCACTGGTCCTGCCGGGAAGGTGAGACTCTCGATCTCTCTGAGAAGTTTGCGTTTACTGTTGTAATGACGAATCCGCTCCAGGCATGCATTAA___GAAAAGAGGAGCTCGTATTGGCCAGTAGGGTCGAAATCCTAAATTGCTATTATTGTCGTATTGGCCAGTAGGGTTGAAATCCTAAATTGCCATTAGTGTCTGTTTCAATTATGCTCATATTAGTCGGTTGCTATCAATGTCTATTTCATATATCTTATATCTCCAACATCATCAGAGCTAGAAGCATTAGCTGCAGTTGCAGGTCGAGATCAAGATAGTTTTCTATTTGATCTACATT

Fln Alignment:

Contig6321___MALYGAHCAGTWCLSC*PPHA*RISAGFAIGPSSGSSRGWKPRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRPLFARQWKHIRKWRRIQMESILPLINARRAVLKQGLHTQPGSPDGANAYIDSLMKLELPECR
B8LLH0_________________MAPYGAPCDGTWCLKCSASHGSRTSAGFDNGPSTVSFRGSRTRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRPFFARQWKRIKELRRIQMDSILPLVNTRRAVLKAGAHTQAGSPDGAHAYIDSLMNLELPEGR

SNPs (tot: 50)

Position	A %	C %	G %	T %	Probability
63	33		66		0.997452
65			66	33	0.997452
113		33		66	0.997452
132		33	66		1.0
190		33		66	0.997452
232	33			66	0.997452
233	33			66	0.997452
234			66	33	0.997452
236			66	33	0.997452
263	33		66		0.997452
422	16			83	0.994512
424		80		20	0.995493
425		80	20		0.995493
426		80		20	0.995493
449	16		83		0.994512
450	83			16	0.994512
451	83		16		0.994512
452		83		16	0.994512
516	14			85	0.993533
517	14	85			0.993533
520	85			14	0.993533
573	60		40		1.0
576	60		40		1.0
600	40		60		1.0
707	14	85			0.993533
756	14		85		0.993533
757	85			14	0.993533
824			60	40	1.0
825			60	40	1.0
951	66		33		0.997452
1102			75	25	0.996473
1103	75			25	0.996473
1204		42	57		1.0
1219			42	57	1.0
1343	10	90			0.90298
1349		90		10	0.90298
1404		87		12	0.992554
1405			87	12	0.992554
1489	80			20	0.995493
1500	16		83		0.994512
1502	16	83			0.994512
1503		83		16	0.994512
1504			85	14	0.993533
1687		28		71	1.0
1701	28		71		1.0
1704	57		42		1.0
1721		20		80	0.995493
1722	20			80	0.995493
1723	80			20	0.995493
1736		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain