SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene5784

Length: 904 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene5784 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9857	11/12

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	uncharacterized protein	-	-	82%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to oxidative stress	GO:0006979	Biological Process	0.0	82%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	0.0	82%

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
406	75		25		0.996473
557	14			85	0.993533
560		85	14		0.993533
585	14		85		0.993533
642			87	12	0.992554
643		87	12		0.992554
644		87		12	0.992554
645	12	87			0.992554
647	12	87			0.992554
649			87	12	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain