SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene4929

Length: 1109 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene4929

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10616	26/33
SustainPine v2.0	sp_v2.0_unigene80095	4/33
SustainPine v2.0	sp_v2.0_unigene80663	2/33

Source	Descriptions	Term	Type	Identity
AutoFact	DUF1068 domain containing protein	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	uncharacterized protein	-	-	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	0.0	74%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF1068	IPR010471	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 44)

Position	A %	C %	G %	T %	Probability
401		75		25	0.996473
447			20	80	0.995493
448			20	80	0.995493
450		80	20		0.995493
455		20	80		0.995493
457		20		80	0.995493
458		20		80	0.995493
459	20			80	0.995493
461	20			80	0.995493
467	80		20		0.995493
468	75	25			0.996473
470	75	25			0.996473
471	75			25	0.996473
472			25	75	0.996473
572	16			83	0.994512
573	16	83			0.994512
576			83	16	0.994512
625	20			20	0.99255
649		20	80		0.995493
652			80	20	0.995493
690			16	83	0.994512
691	83			16	0.994512
693	83			16	0.994512
758	80	20			0.995493
768	20		80		0.995493
769	20		80		0.995493
825	12		87		0.992554
830		87		12	0.992554
929	88			11	0.923564
930		88	11		0.923564
931	88			11	0.923564
984	90			10	0.90298
985	90			10	0.90298
989	88			11	0.923564
1016	20			80	0.995493
1017		20	80		0.995493
1019	80			20	0.995493
1020			80	20	0.995493
1045	75	25			0.996473
1048		75		25	0.996473
1075	33		66		0.997452
1076	66	33			0.997452
1078			66	33	0.997452
1079		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain