SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene4785

Length: 634 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene4785 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11917	8/8

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF581 domain containing protein	-	-	2.0e-25	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	uncharacterized protein	-	-	0.0	66%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF581	IPR007650	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
248	33		66		0.997452
251	66			33	0.997452
252			66	33	0.997452
422	20	80			0.995493
513	80			20	0.995493
610	25	75			0.996473
629	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain