SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene4633

Length: 671 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene4633 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene883	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj\|BAB11582.1\| unnamed protein product [Arabidopsis thaliana] gb\|AED96466.1\| transducin/WD40 domain-containing protein [Arabidopsis thaliana]	-	-	66%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	60%
Blast2go	wd repeat-containing protein 44-like	-	-	80%

Source	GOs	Term	Type	Identity
Blast2go	signal transduction	GO:0007165	Biological Process	80%
Blast2go	signal transducer activity	GO:0004871	Molecular Function	80%
Blast2go	heterotrimeric G-protein complex	GO:0005834	Cellular Component	80%

Source	InterPros	Term	Type	Identity
Sma3	Regulator of chromosome condensation, RCC1	IPR000408	-	-
Sma3	Dynamin, GTPase domain	IPR001401	-	-
Sma3	WD40 repeat	IPR001680	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3		IPR019782	-	-

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain