SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene4596

Length: 609 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene4596 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3185	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Beta-galactosidase n=1 Tax=Picea sitchensis RepID=A9NUR2_PICSI	-	-	48%
FL-Next	sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	35%
Blast2go	beta-galactosidase 3-like	-	-	62%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Glycosylases, Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.	EC:3.2.1.-	-	0.0	62%

Source	KEGGs	Term	Identity
Blast2go	Ascorbate and aldarate metabolism	00053	62%
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	62%
Blast2go	Amino sugar and nucleotide sugar metabolism	00520	62%
Blast2go	Glycosaminoglycan degradation	00531	62%
Blast2go	Metabolic pathways	01100	62%

Source	GOs	Term	Type	Identity
Blast2go	carbohydrate metabolic process	GO:0005975	Biological Process	62%
Blast2go	hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0004553	Molecular Function	62%
Blast2go	protein binding	GO:0005515	Molecular Function	62%
Blast2go	sugar binding	GO:0005529	Molecular Function	62%

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycoside hydrolase, family 35	IPR001944	-	0.0	-
Sma3	D-galactoside/L-rhamnose binding SUEL lectin domain	IPR000922	-	0.0	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain