SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene4319

Length: 598 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene4319 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18487	11/11

Source	Descriptions	Term	Type	Identity
AutoFact	Heat shock 70 kDa protein, mitochondrial n=3 Tax=rosids RepID=HSP7M_PHAVU	-	-	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	68%
Blast2go	heat shock 70 kda mitochondrial-like	-	-	90%

Source	InterPros	Term	Type	Identity
Sma3	Chaperone DnaK	IPR012725	-	-
Sma3	Heat shock protein 70, conserved site	IPR018181	-	-
Sma3	Heat shock protein Hsp70	IPR001023	-	-
Sma3	Heat shock protein 70	IPR013126	-	-

Full-Lengther Next Prediction

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
204	16	16			0.988813
205		83		16	0.994512
206	16			83	0.994512
233	80	20			0.995493
236			80	20	0.995493
249	25			75	0.996473
250		75		25	0.996473
447		75		25	0.996473
448		75		25	0.996473
539	66	33			0.997452
541			66	33	0.997452
542			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain