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UniGene Name: biog3_v1.0_unigene4290
Length: 232 nt
 UniGene Fasta
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| >biog3_v1.0_unigene4290
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Ace file of the UniGene biog3_v1.0_unigene4290
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
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| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene4571 | 2/3 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHW1_RICCO | - | - | 0.0 | 45% |
| Blast2go | subtilisin-like protease-like | - | - | 0.0 | 64% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Hydrolases, Acting on peptide bonds (peptide hydrolases), Serine endopeptidases. | EC:3.4.21.- | - | 0.0 | 64% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | proteolysis | GO:0006508 | Biological Process | 0.0 | 64% |
| Blast2go | serine-type endopeptidase activity | GO:0004252 | Molecular Function | 0.0 | 64% |
| Blast2go | cytoplasmic membrane-bounded vesicle | GO:0016023 | Cellular Component | 0.0 | 64% |
| Blast2go | apoplast | GO:0048046 | Cellular Component | 0.0 | 64% |
| Full-Lengther Next Prediction |
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Fln status: unknown
Fln database: testcode
Fln msg: Non coding ORF found >= 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
