SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene4215

Length: 1739 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene4215

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16094	9/10

Source	Descriptions	Term	Type	Identity
AutoFact	2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Mesembryanthemum crystallinum RepID=PMGI_MESCR	-	-	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	bisphosphoglycerate-independent phosphoglycerate mutase	-	-	90%

Source	InterPros	Term	Type	Identity
Sma3	Alkaline phosphatase-like, alpha/beta/alpha	IPR017849	-	-
Sma3	BPG-independent PGAM, N-terminal	IPR011258	-	-
Sma3	Metalloenzyme	IPR006124	-	-
Sma3	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent	IPR005995	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NUH9

Fln msg: your sequence is longer than subject: 498 - 410

Fln protein: IKAHGPAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDYALASGKIYQGEGFTYIKECFENGTLHLIGLLSDGGVHSRLDQLQLLLKGVPQYGAKRIRVHILTDGRDCLDGSSIGYVETLENDLAELRKQGVDALIASGGGRMYVTMDRYENDWGVVKRGWDAQVLGKAPYKFRNAVEAVKKLREAPKASDQYLPPFVIVDENDKAVGPILDGDAVVTINFRADRMTMVAKAFEYENFSAFDRVRYPKIRYAGMLQYDGELKLPAHYLVSPPDIDRTSGEYLVHNGIRTFACSETVKFGHVTFFWNGNRSGYFNEELEEYVEIPSDSGITFNVQPKMKALEIAERTRDAILSGRYDQVRVNLPNGDMVGHTGDIEATVVACKAADEAVKIILDAIEQVGGIYLVTADHGNAEDMVKRNKTGQPAKDKDGKIQILTSHTCSPVPIAIGGPGLTKGVRFRTDLKQPGLANVASTIINLLGFEAPSDYEPTLIEVASN*

Protein Length: 499

Fln nts: GATCAAAGCACATGGACCTGCAGTTGGACTCCCTACTGAAGATGATATGGGTAACAGTGAAGTAGGTCACAATGCTCTCGGAGCTGGGAGAATATTTGCTCAAGGAGCAAAATTAGTGGATTACGCTCTTGCCTCTGGCAAAATCTATCAGGGAGAAGGGTTTACATACATTAAGGAGTGCTTTGAAAATGGCACACTTCATCTCATTGGCCTTTTGAGTGATGGTGGTGTCCACTCACGTTTAGATCAGTTGCAGTTGCTTTTGAAAGGTGTTCCACAATATGGTGCAAAAAGGATCCGAGTGCATATTCTCACTGATGGTCGTGATTGTCTGGATGGGTCAAGTATTGGCTATGTAGAGACACTAGAGAATGATCTTGCTGAGTTACGGAAACAAGGTGTTGATGCTTTAATTGCCTCTGGTGGAGGTCGCATGTATGTGACAATGGATCGCTATGAGAATGATTGGGGTGTGGTCAAACGAGGCTGGGATGCCCAGGTTTTGGGAAAAGCACCTTATAAATTTAGAAATGCTGTGGAAGCAGTCAAGAAGCTTCGGGAAGCTCCAAAAGCTAGTGATCAATATTTACCTCCATTTGTCATTGTCGATGAAAATGACAAGGCCGTTGGACCTATTCTTGATGGAGATGCAGTGGTGACCATTAATTTCCGAGCAGATCGTATGACTATGGTTGCTAAAGCATTCGAATATGAGAATTTTAGTGCATTTGATCGAGTTCGGTATCCTAAAATTCGATATGCAGGAATGCTTCAGTATGATGGAGAGTTAAAGCTTCCGGCTCATTATCTTGTTTCCCCACCAGATATCGATAGAACATCAGGAGAATATCTTGTACACAATGGGATACGGACATTTGCATGCAGTGAAACTGTAAAATTCGGCCACGTTACATTTTTCTGGAACGGCAACCGGTCCGGATATTTTAACGAGGAACTGGAGGAATATGTGGAAATCCCAAGTGATTCAGGAATCACATTCAATGTCCAACCAAAAATGAAGGCCTTGGAAATTGCTGAAAGAACCAGAGATGCCATATTGAGTGGCCGTTATGATCAGGTTCGTGTGAATCTGCCAAATGGTGATATGGTAGGGCACACTGGCGATATAGAGGCAACGGTTGTTGCGTGTAAGGCTGCTGATGAGGCTGTAAAGATTATTCTTGATGCAATAGAACAAGTTGGCGGCATCTACCTTGTTACGGCAGATCATGGAAATGCCGAGGATATGGTGAAAAGAAACAAAACAGGTCAACCGGCGAAGGATAAAGATGGAAAAATTCAAATTCTGACTTCTCATACTTGTTCCCCAGTGCCAATTGCTATAGGAGGTCCTGGACTTACGAAAGGAGTGAGGTTTCGTACTGATTTGAAACAGCCCGGGCTTGCAAATGTTGCCTCCACCATAATTAATCTCTTGGGATTCGAGGCTCCAAGTGATTATGAGCCAACTTTGATTGAAGTTGCCAGCAATTGA___TCTATGAGTCAAGTATGGCAATTTTTGGAAGCCAAGTTTAGTAGGTCATTTCTTAAATTTGTCATAATTGTTCTGTTGTTTCAGAATGCACCCTGAGAATAGAATCTAGATACAGTAATTGGTTAGTTCTGCGGCTTTTTGCGAATAAATTTATGTTGTGAGTAGCATACTTATTCAAATGATACTAATTTATCAAGATGCTTGTGATATTTCCTTTTAAGAGGAAATTTAATAATGCTAAAGG

Fln Alignment:

Contig4215___IKAHGPAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDYALASGKIYQGEGFTYIKECFENGTLHLIGLLSDGGVHSRLDQLQLLLKGVPQYGAKRIRVHILTDGRDCLDGSSIGYVETLENDLAELRKQGVDALIASGGGRMYVTMDRYENDWGVVKRGWDAQVLGKAPYKFRNAVEAVKKLREAPKASDQYLPPFVIVDENDKAVGPILDGDAVVTINFRADRMTMVAKAFEYENFSAFDRVRYPKIRYAGMLQYDGELKLPAHYLVSPPDIDRTSGEYLVHNGIRTFACSETVKFGHVTFFWNGNRSGYFNEELEEYVEIPSDSGITFNVQPKMKALEI
A9NUH9_________________IKAHGPAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDYALASGKIYEGAGFKYIKESFENGTLHLIGLLSDGGVHSRLDQLQLLLKGAAQNGAKRIRVHILTDGRDCLDGSSIGYVETLENDLVELQKQGVDAQIASGGGRMYVTMDRYENDWGVVKRGWDAQVLGKAPHKFRSALEAVKKLREDPKASDQYLPPFVIVDENEKAVGPILDGDAVVTINFRADRMTMVAKAFEYENFSAFDRVRYPKIRYAGMLQYDGELKLPSHYLVSPPDIDRTSGEYLVHNGIRTFACSETVKFGHVTFFWNGNRSGYFNEELETYVEIPSDSGITFNVKPKNKRCHI

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
1551	87	12			0.992554
1597		12	87		0.992554
1599	87			12	0.992554
1610			85	14	0.993533
1618	16			83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain