SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene4116

Length: 700 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene4116

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene23121	3/18
SustainPine v2.0	sp_v2.0_unigene61044	15/18

Source	Descriptions	Term	Type	Identity
AutoFact	protein trichome birefringence-like 25 [Arabidopsis thaliana] gb\|AAO42299.1\| unknown protein [Arabidopsis thaliana] gb\|AAO64043.1\| unknown protein [Arabidopsis thaliana] gb\|AEE27285.1\| protein trichome birefringence-like 25 [Arabidopsis thaliana]	-	-	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	protein	-	-	70%

Source	InterPros	Term	Type	e value	Identity
Sma3		IPR004253	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
220	12		87		0.992554
221	87			12	0.992554
333	14		85		0.993533
336		85		14	0.993533
416	22		77		0.999999
417		88		11	0.923564
418	11	77		11	0.968132
419		87		12	0.992554
420	87			12	0.992554
466		60		40	1.0
470	20	80			0.995493
472		80		20	0.995493
499		40		40	1.0
512	83			16	0.994512
513	83		16		0.994512
560	11	88			0.923564
562		88		11	0.923564
589			88	11	0.923564
590	87			12	0.992554
618		85		14	0.993533
632	14		85		0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain