SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene3269

Length: 650 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene3269 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene25916	2/7
SustainPine v2.0	sp_v2.0_unigene32861	5/7

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI	-	-	6.0e-23	54%
FL-Next	sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%
Blast2go	protein	-	-	7.04015e-28	70%

Source	InterPros	Term	Type	e value	Identity
Sma3	Uncharacterised protein family UPF0497, trans-membrane plant subgroup	IPR006459	-	0.0	-
Sma3	Uncharacterised protein family UPF0497, trans-membrane plant	IPR006702	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
450	25	75			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain