SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene3192

Length: 317 nt

UniGene Fasta

>biog3_v1.0_unigene3192
AATCTACAAGCTCGGAAAAGATATCAACAGATTCAACAAAGAATGTTGCAGTTCTGGCAGGAGTGGTTGCTGTAGTTGCTGGTGTCTGGTGGTATGTTAAAGCAAGTCCCAAAAAAAGTGAACAACATGACTAAATCTTCTTTACAAGACTCTTTTTCGTCACAGAAAGTGAAGTACGTTTTTGCAACAGCAGAATTTCAATAAATAACATGCTGTATGATTCAGAAGGCCTTTCTTCAATTTGCCATAATTTCAGTTAGTAGCTTGTTAAAGATACAATCTAGCATGATCCTTGCAGAGTGTCGTGAAATATATTG

Ace file of the UniGene biog3_v1.0_unigene3192

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17209	4/4

Source	Descriptions	Term	Type	e value	Identity
AutoFact	F1F0-ATPase inhibitor protein [Arabidopsis thaliana]	-	-	2.0e-08	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	f1f0-atpase inhibitor protein	-	-	1.83481e-39	65%

Source	GOs	Term	Type	e value	Identity
Blast2go	copper ion binding	GO:0005507	Molecular Function	1.83481e-39	65%
Blast2go	mitochondrial respiratory chain complex I	GO:0005747	Cellular Component	1.83481e-39	65%
Blast2go	nucleolus	GO:0005730	Cellular Component	1.83481e-39	65%
Blast2go	vacuole	GO:0005773	Cellular Component	1.83481e-39	65%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NPB0

Fln msg: your sequence is shorter than subject: 44 - 121

Fln protein: STSSEKISTDSTKNVAVLAGVVAVVAGVWWYVKASPKKSEQHD*

Protein Length: 45

Fln nts: AATCTACAAGCTCGGAAAAGATATCAACAGATTCAACAAAGAATGTTGCAGTTCTGGCAGGAGTGGTTGCTGTAGTTGCTGGTGTCTGGTGGTATGTTAAAGCAAGTCCCAAAAAAAGTGAACAACATGACTAA___ATCTTCTTTACAAGACTCTTTTTCGTCACAGAAAGTGAAGTACGTTTTTGCAACAGCAGAATTTCAATAAATAACATGCTGTATGATTCAGAAGGCCTTTCTTCAATTTGCCATAATTTCAGTTAGTAGCTTGTTAAAGATACAATCTAGCATGATCCTTGCAGAGTGTCGTGAAATATATTG

Fln Alignment:

Contig3192___STSSEKISTDSTKNXXXXXXXXXXXXXXWWYVKASPKKSEQHD
A9NPB0_________________STSSEKVSTDSTKNVAVLAGVVAVVAGVWWYVKASSKTTEQHD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain