SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene2086

Length: 1070 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene2086

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1623	17/17

Source	Descriptions	Term	Type	Identity
AutoFact	SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref\|NP_850809.1\| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref\|NP_974767.1\| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref\|NP_001078572.1\| SCP1-like small phosphatase 5 [Arabidopsis	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	36%
Blast2go	protein	-	-	74%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Acting on ester bonds, Phosphoric monoester hydrolases.	EC:3.1.3.-	-	0.0	74%

Source	KEGGs	Term	Identity
Blast2go	Fructose and mannose metabolism	00051	74%
Blast2go	Ascorbate and aldarate metabolism	00053	74%
Blast2go	Lipopolysaccharide biosynthesis	00540	74%
Blast2go	Ether lipid metabolism	00565	74%
Blast2go	Sphingolipid metabolism	00600	74%
Blast2go	Thiamine metabolism	00730	74%
Blast2go	Riboflavin metabolism	00740	74%
Blast2go	Nicotinate and nicotinamide metabolism	00760	74%
Blast2go	Metabolic pathways	01100	74%
Blast2go	Biosynthesis of secondary metabolites	01110	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	dephosphorylation	GO:0016311	Biological Process	0.0	74%
Blast2go	phosphatase activity	GO:0016791	Molecular Function	0.0	74%

Source	InterPros	Term	Type	e value	Identity
Sma3	NLI interacting factor	IPR004274	-	0.0	-
Sma3	Dullard phosphatase domain, eukaryotic	IPR011948	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQY3

Fln msg: Distance to subject end: 261 aas, your sequence is shorter than subject: 256 - 517

Fln protein: MKTKVRKASATVGGGQGCPNLNKSKKACHYLGINNEAAELMTSTPNCRFVCISSSCLMPGHEIFGGKWDKNADHIRESADDACQDLRPTFSAIDVPLVDQKVYMQTAHPSAVDTLFSPVPCMPKVEASTTCYGSDNDRGDADEKIDMVDGRQEANRIACEDNCTTKTISAAYPTSDVFRDATITRFSAETAVTVHDILRNTESSHEDEFIGSQTAFDVTESCLIWPLVDENAAADHRHETLSVEEALLNSDGACLF

Protein Length: 257

Fln nts: GAGGTCCAGTGAAGCTTGGAGCAGCTAGATTTTTCATTTCTTTCGAGGCAATCTTTCACAATGGGTGCCGGAAATATTGTTTCTGATGATGAAGATCAAAGAAGTAATTATTGATCTCACTTCTGTAGTCAAACCCAATTCCCAAAGGATGTACGGTTGACTGGTTATTTTATAATCTTTTTGCAAACTGGATAACTATGCTTATATCAACATCCTTTTAGTTATTGCATTGTGCATGGGGTTCTGCTAAATGAAGTGTTGCATTGGAAATCTCCATGAGTACGTAGAACAAATTGCATA_-_ATGAAGACCAAAGTAAGGAAGGCTTCAGCAACAGTTGGTGGAGGCCAAGGATGTCCCAATTTAAATAAGAGCAAGAAAGCTTGCCATTATCTTGGAATAAATAATGAGGCGGCAGAATTAATGACTTCCACGCCGAATTGTAGGTTTGTGTGCATTTCATCGAGCTGCTTAATGCCTGGTCATGAAATTTTTGGAGGCAAGTGGGATAAGAATGCTGACCATATAAGAGAGTCGGCTGATGATGCTTGTCAAGATCTAAGACCAACATTCTCTGCTATAGATGTGCCATTGGTTGATCAAAAGGTATACATGCAAACAGCTCATCCATCTGCAGTTGACACCCTATTTTCACCTGTTCCTTGTATGCCAAAGGTTGAAGCCTCAACAACTTGTTACGGTAGTGATAATGACCGTGGAGATGCTGATGAGAAAATTGACATGGTAGATGGCAGACAAGAGGCCAACAGGATTGCATGTGAAGATAACTGTACGACTAAGACTATTTCAGCTGCTTATCCAACTTCAGATGTATTTAGAGATGCAACTATTACTAGATTTTCTGCAGAGACAGCTGTGACAGTGCACGATATATTGAGAAACACGGAAAGTTCACATGAGGATGAATTTATTGGCTCTCAAACGGCATTTGATGTTACTGAGAGTTGTCTCATATGGCCTCTTGTAGATGAAAATGCAGCCGCTGATCACAGGCATGAAACTTTATCTGTTGAGGAAGCTCTCTTAAACTCGGATGGTGCATGCTTGTTCTT

Fln Alignment:

Contig2086___IMKTKVRKASATVGGG-QGCPNLNKS-KKACHYLGINN-EAAELMTSTPNC-RFVCISSSCLMPGHEIFGGKWDKNADHIRESADDACQDLRPTFSAIDVPLVDQKVYMQTAHPSAVDTLFSPVPCMPKVEASTTCYGSDNDRGDADEKIDMVDGRQEANRIACEDNCTTKTISAAYPTSDVFRDATITRFSAETAVTVHDILRNTESSHEDEFIGSQTAFDVTESCLIWPLVDENAAADHRHETLSVEEALLNSDGACLF
B8LQY3_________________MMKNKSRKPSTRVGNSEQICPSSNRRRKKSRHDLEMKERKVAELITSSARKHRIVHVSTSLVSPNRQNIGGNGVTAVNGNTELADDVCQDLRLAFSTIDGPCIERK----KTRPSVVGTIFSPVFHMSKDATSGTSTTCTVDQGELLVHKNQAANKRNENGDSFEEH--KRSVIDTPPTSGNLQKESLTRLSTDMAEAVQGSVTNSGNLPDDELVGSQTAFDATQNGIEWPLVDQNTSIDHRHGSEPVQEGLLSLDGTSLF

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
321	25		75		0.996473
791		85		14	0.993533
841	12		87		0.992554
842	87			12	0.992554
843		12	87		0.992554
844	87			12	0.992554
846			87	12	0.992554
889	57		42		1.0
932	33			50	1.0
933		33		16	1.0
1004	33	66			0.997452
1006	33		66		0.997452
1007		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain