Sustainpine_db
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Assembly Name: SustainPine v3.0

Listing Unigenes with SSRs


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Download all SSRs (Mreps output file):

Unigen Start position End position Sequence
sp_v3.0_unigene199482 234 248 GATGC GATGC GATGC
sp_v3.0_unigene199520 299 313 AGGGG AGGGG AGGGG
sp_v3.0_unigene199935 55 72 CCGATG CCGATG CCGATG
sp_v3.0_unigene199984 31 58 GGCGGCGGT GGCGGCGGT GGCGGCGGT G
sp_v3.0_unigene200374 47 69 CCATCAA CCATCAA CCATCAA CC
sp_v3.0_unigene200438 130 147 GTTGCT GTTGCT GTTGCT
sp_v3.0_unigene200505 17 39 CCCAACG CCCAACG CCCAACG CC
sp_v3.0_unigene200681 208 226 AGGGCA AGGGCA AGGGCA A
sp_v3.0_unigene200687 261 280 CACTGA CACTGA CACTGA CA
sp_v3.0_unigene200701 5 137 AAGAGGCCCTCAAGACTACAGACCTCCCGTGGATGC AAGAGGCCCTCAAGACTACAGACCTCCCGTGGATGC AAGAGGCCCTCAAGACTACAGACCTCCCGTGGATGC AAGAGGCCCTCAAGACTACAGACCT
sp_v3.0_unigene200782 157 175 TTGATT TTGATT TTGATT T
sp_v3.0_unigene200877 1 17 TCTCA TCTCA TCTCA TC
sp_v3.0_unigene200894 100 115 TTATC TTATC TTATC T
sp_v3.0_unigene201200 2 21 TATGT TATGT TATGT TATGT
sp_v3.0_unigene201388 153 167 CTACG CTACG CTACG
sp_v3.0_unigene201403 13 30 GGAGAA GGAGAA GGAGAA
sp_v3.0_unigene201517 219 238 ATGAAT ATGAAT ATGAAT AT
sp_v3.0_unigene201550 439 453 GATAA GATAA GATAA
sp_v3.0_unigene201662 107 123 TTATC TTATC TTATC TT
sp_v3.0_unigene201985 761 775 TAGCA TAGCA TAGCA


Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain