Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: ribosomal pseudouridine

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene29148 SustainPine v1.1 1188
AutoFact: ribosomal pseudouridine synthase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal pseudouridine 0.0
C-terminus
sp_v1.1_unigene40664 SustainPine v1.1 330
AutoFact: ribosomal pseudouridine synthase, putative 2.0e-23
FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ribosomal pseudouridine 1.15098e-25
Internal
sp_v1.1_unigene46089 SustainPine v1.1 487
AutoFact: ribosomal pseudouridine synthase, putative (EC:3.2.1.17) 3.0e-30
FL-Next: sp=RNA pseudourine synthase 4, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribosomal pseudouridine 5.76489e-33
Internal
sp_v1.1_unigene46273 SustainPine v1.1 375
AutoFact: ribosomal pseudouridine synthase, putative (EC:3.2.1.17) 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal pseudouridine 1.24836e-36
Internal
sp_v1.1_unigene48918 SustainPine v1.1 277
AutoFact: RNA pseudourine synthase 3, mitochondrial n=2 Tax=Arabidopsis RepID=PUS3_ARATH 1.0e-22
FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribosomal pseudouridine 6.27882e-24
Internal
sp_v1.1_unigene65107 SustainPine v1.1 370
AutoFact: Isoform 2 of RNA pseudourine synthase 3, mitochondrial n=1 Tax=Arabidopsis thaliana RepID=Q5XET6-2 1.0e-20
FL-Next: Isoform 2 of RNA pseudourine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 0.0
Blast2go: ribosomal pseudouridine 1.14168e-20
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain