Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: retroelement pol polyprotein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene32963 SustainPine v1.1 356
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 7.7371e-14
Internal
sp_v1.1_unigene33638 SustainPine v1.1 324
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 1.04051e-16
Internal
sp_v1.1_unigene39845 SustainPine v1.1 467
• AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 8.0e-26
• FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
• Blast2go: retroelement pol polyprotein 2.12147e-27
Internal
sp_v1.1_unigene41481 SustainPine v1.1 436
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 1.44952e-12
C-terminus
sp_v1.1_unigene49427 SustainPine v1.1 172
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 7.21931e-12
Putative N-terminus
sp_v1.1_unigene49702 SustainPine v1.1 406
• AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retroelement pol polyprotein 1.7849e-18
Internal
sp_v1.1_unigene50766 SustainPine v1.1 320
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 4.12109e-11
Internal
sp_v1.1_unigene51217 SustainPine v1.1 436
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 9.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 9.67784e-25
Internal
sp_v1.1_unigene53809 SustainPine v1.1 459
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 1.14242e-17
Putative C-terminus
sp_v1.1_unigene56197 SustainPine v1.1 384
• AutoFact: rve domain containing protein 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 5.51044e-28
Internal
sp_v1.1_unigene58172 SustainPine v1.1 521
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 3.47139e-31
Internal
sp_v1.1_unigene66427 SustainPine v1.1 489
• AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 3.87155e-29
Internal
sp_v1.1_unigene66843 SustainPine v1.1 663
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 5.72103e-22
C-terminus
sp_v1.1_unigene71112 SustainPine v1.1 430
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 7.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 1.78842e-26
Internal
sp_v1.1_unigene71612 SustainPine v1.1 487
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus. 0.0
• Blast2go: retroelement pol polyprotein 1.83631e-15
Internal
sp_v1.1_unigene74712 SustainPine v1.1 426
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 4.28604e-20
Internal
sp_v1.1_unigene76254 SustainPine v1.1 310
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 9.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 1.65963e-16
Internal
sp_v1.1_unigene78199 SustainPine v1.1 302
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 4.56965e-14
Putative C-terminus
sp_v1.1_unigene82706 SustainPine v1.1 529
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retroelement pol polyprotein 1.12287e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain