Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: chup1 (chloroplast unusual positioning 1)

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene30809 SustainPine v1.1 488
• AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chup1 (chloroplast unusual positioning 1) 0.0
Internal
sp_v1.1_unigene37369 SustainPine v1.1 744
• AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 8.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chup1 (chloroplast unusual positioning 1) 3.7717e-18
C-terminus
sp_v1.1_unigene53242 SustainPine v1.1 402
• AutoFact: CHUP1; CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) 3.0e-23
• FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: chup1 (chloroplast unusual positioning 1) 1.85039e-23
Internal
sp_v1.1_unigene53824 SustainPine v1.1 265
• AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 4.0e-16
• FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: chup1 (chloroplast unusual positioning 1) 4.96187e-16
Internal
sp_v1.1_unigene69980 SustainPine v1.1 295
• AutoFact: CHUP1; CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chup1 (chloroplast unusual positioning 1) 6.42298e-16
Putative C-terminus
sp_v1.1_unigene71572 SustainPine v1.1 311
• AutoFact: CHUP1; CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chup1 (chloroplast unusual positioning 1) 2.16183e-24
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain