Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: dna mismatch repair protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene6802 SustainPine v1.1 318
AutoFact: MLH3; MLH3 (MUTL PROTEIN HOMOLOG 3); ATP binding / mismatched DNA binding; K08739 DNA mismatch repair protein MLH3 3.0e-21
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna mismatch repair protein 6.11493e-25
Putative N-terminus
sp_v1.1_unigene23704 SustainPine v1.1 552
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 4.0e-14
FL-Next: sp=DNA mismatch repair protein MSH2; Zea mays (Maize). 0.0
Blast2go: dna mismatch repair protein 6.12626e-14
C-terminus
sp_v1.1_unigene29647 SustainPine v1.1 773
AutoFact: MSH3; MSH3 (Arabidopsis homolog of DNA mismatch repair protein MSH3); damaged DNA binding / mismatched DNA binding / protein binding; K08736 DNA mismatch repair protein MSH3 0.0
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
sp_v1.1_unigene30608 SustainPine v1.1 363
AutoFact: DNA mismatch repair protein n=1 Tax=Cucumis sativus RepID=B3U2A3_CUCSA 2.0e-20
FL-Next: tr=DNA mismatch repair protein; Cucumis sativus (Cucumber). 0.0
Blast2go: dna mismatch repair protein 3.20415e-20
C-terminus
sp_v1.1_unigene36511 SustainPine v1.1 307
AutoFact: DNA mismatch repair protein n=1 Tax=Cucumis sativus RepID=B3U2A3_CUCSA 3.0e-20
FL-Next: tr=DNA mismatch repair protein; Cucumis sativus (Cucumber). 0.0
Blast2go: dna mismatch repair protein 6.43665e-20
Putative C-terminus
sp_v1.1_unigene37325 SustainPine v1.1 1004
AutoFact: DNA mismatch repair protein mlh1, putative; K08734 DNA mismatch repair protein MLH1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna mismatch repair protein 0.0
N-terminus
sp_v1.1_unigene37367 SustainPine v1.1 856
AutoFact: DNA mismatch repair protein pms2, putative; K10858 DNA mismatch repair protein PMS2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein 0.0
Complete
sp_v1.1_unigene37563 SustainPine v1.1 398
AutoFact: DNA mismatch repair protein mlh1, putative; K08734 DNA mismatch repair protein MLH1 1.0e-34
FL-Next: tr=Putative uncharacterized protein Sb03g046470; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: dna mismatch repair protein 5.63197e-37
Putative C-terminus
sp_v1.1_unigene38237 SustainPine v1.1 815
AutoFact: DNA mismatch repair protein mlh1, putative; K08734 DNA mismatch repair protein MLH1 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
sp_v1.1_unigene39082 SustainPine v1.1 428
AutoFact: DNA mismatch repair MutS family protein 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna mismatch repair protein 5.04839e-20
Internal
sp_v1.1_unigene44730 SustainPine v1.1 641
AutoFact: DNA mismatch repair protein (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1XBQ6_SOLLC 0.0
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
sp_v1.1_unigene46487 SustainPine v1.1 342
AutoFact: mismatch repair-related protein; K08739 DNA mismatch repair protein MLH3 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein 5.10208e-21
C-terminus
sp_v1.1_unigene53642 SustainPine v1.1 217
AutoFact: DNA mismatch repair protein MSH3, putative; K08736 DNA mismatch repair protein MSH3 5.0e-26
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 1.43431e-28
Internal
sp_v1.1_unigene53738 SustainPine v1.1 451
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna mismatch repair protein 3.6375e-31
Internal
sp_v1.1_unigene53819 SustainPine v1.1 378
AutoFact: Similarity to mismatch repair protein MutS n=1 Tax=Arabidopsis thaliana RepID=Q9LTP4_ARATH 2.0e-33
FL-Next: tr=At3g20475; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 3.36215e-33
Putative N-terminus
sp_v1.1_unigene56836 SustainPine v1.1 309
AutoFact: DNA mismatch repair protein MSH3, putative; K08736 DNA mismatch repair protein MSH3 1.0e-11
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 2.34491e-15
Internal
sp_v1.1_unigene62136 SustainPine v1.1 225
AutoFact: DNA mismatch repair protein pms2, putative; K10858 DNA mismatch repair protein PMS2 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna mismatch repair protein 4.78254e-19
Internal
sp_v1.1_unigene74627 SustainPine v1.1 248
AutoFact: DNA mismatch repair protein (Fragment) n=1 Tax=Petunia x hybrida RepID=Q6DQL5_PETHY 2.0e-17
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 3.3466e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain