Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: retrotransposon ty3-gypsy subclass

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene75251 SustainPine v1.1 241
• AutoFact: Polyprotein n=1 Tax=Oryza australiensis RepID=Q0ZLH4_9ORYZ 4.0e-16
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 8.29982e-16
Internal
sp_v1.1_unigene76064 SustainPine v1.1 384
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QUR6_ORYSJ 3.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 4.96516e-35
N-terminus
sp_v1.1_unigene76547 SustainPine v1.1 430
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=4 Tax=Oryza sativa RepID=Q109C6_ORYSJ 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 2.76e-27
Putative Complete
sp_v1.1_unigene76970 SustainPine v1.1 348
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 7.0e-27
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 1.38336e-26
Internal
sp_v1.1_unigene79204 SustainPine v1.1 358
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QSS3_ORYSJ 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 3.85854e-28
Putative Complete
sp_v1.1_unigene79256 SustainPine v1.1 379
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QUR6_ORYSJ 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 2.95519e-37
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain