Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: copia-type polyprotein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene58233 SustainPine v1.1 546
• AutoFact: rve domain containing protein 7.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 7.86535e-41
Internal
sp_v1.1_unigene58240 SustainPine v1.1 790
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 0.0
Internal
sp_v1.1_unigene58281 SustainPine v1.1 340
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.75559e-26
Internal
sp_v1.1_unigene61835 SustainPine v1.1 458
• AutoFact: NV18815; similar to putative retroelement pol polyprotein 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 8.83354e-18
Putative C-terminus
sp_v1.1_unigene62177 SustainPine v1.1 472
• AutoFact: Retrotransposon Tto1 DNA n=1 Tax=Nicotiana tabacum RepID=Q9ZRJ0_TOBAC 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.98246e-14
Internal
sp_v1.1_unigene65228 SustainPine v1.1 429
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 7.00238e-39
Internal
sp_v1.1_unigene66725 SustainPine v1.1 337
• AutoFact: NV18815; similar to putative retroelement pol polyprotein 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 8.81574e-18
Internal
sp_v1.1_unigene68904 SustainPine v1.1 475
• AutoFact: Integrase n=1 Tax=Cucumis melo RepID=A6YTD9_CUCME 5.0e-30
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: copia-type polyprotein 3.27184e-30
Putative C-terminus
sp_v1.1_unigene70019 SustainPine v1.1 313
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: copia-type polyprotein 3.74419e-16
Internal
sp_v1.1_unigene70583 SustainPine v1.1 314
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 6.48506e-21
Internal
sp_v1.1_unigene71136 SustainPine v1.1 311
• AutoFact: NV18815; similar to putative retroelement pol polyprotein 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.55962e-17
Internal
sp_v1.1_unigene72127 SustainPine v1.1 441
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 6.67928e-21
Internal
sp_v1.1_unigene72163 SustainPine v1.1 369
• AutoFact: Unassigned protein 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.18108e-17
Internal
sp_v1.1_unigene72508 SustainPine v1.1 284
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 5.68123e-17
Internal
sp_v1.1_unigene72762 SustainPine v1.1 417
• AutoFact: Copia-type polyprotein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 6.25777e-21
Internal
sp_v1.1_unigene73719 SustainPine v1.1 435
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.40157e-23
Internal
sp_v1.1_unigene73865 SustainPine v1.1 465
• AutoFact: copia protein-like 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.06835e-22
Internal
sp_v1.1_unigene74201 SustainPine v1.1 381
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.91169e-28
Internal
sp_v1.1_unigene74457 SustainPine v1.1 386
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 7.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 3.42078e-13
Internal
sp_v1.1_unigene75246 SustainPine v1.1 284
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.38768e-15
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain